Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0882 ATGTCTGCTGCTGTGTCTGCAACCAAGGATGTTCCCTTCAATGCTCATTTGGAGGAAGATATCAAAAACAAAGAAATCAACAAGGTTGTTAATGTTGGGGAAGCAGACCAGATTCCTTACAATGATGATGCTGAAGGAACTGATTCAGAGGCAGAGGAAGACCCCAAGTTGGAATTGGATCTTGGCCCTCAGTGTTCCCTCAAGGAACAGCTTGAGAAAGATAAAGAGGATGAAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAGGTATTGATGTGTCTGCTGTTGGAGAAAACAAAGAGCCCGAAGTGAAGATAGTGAGCCTTACCATTATATGTCCAGGGAGGCCTGACCTCATTCTGCCAATTCCATTTACTTCTGATGCTAAGAAGAGTATCTTCACCCTTAAGGAAGGAAGTCAATACCAGTTGAAATTCTCTTTCACTGTCTCCAACAACATTGTTTCTGGCCTCAAATACACCAATGTTGTTTGGAAAACTGGGCTTAGAGTGGACAACACAAAAAAAATGTTGGGAACTTATAGCCCAAGCCAGGAACTATATACATATGAATTGGAAGAAGAAACTACCCCTTCAGGGTTGTTTGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGGAAATGCTACTTGGATACTAGTTACCACTTTGAAATTCAGAAGAATTGGCCTACACCCATCTAA 717 0.4184 MSAAVSATKDVPFNAHLEEDIKNKEINKVVNVGEADQIPYNDDAEGTDSEAEEDPKLELDLGPQCSLKEQLEKDKEDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICPGRPDLILPIPFTSDAKKSIFTLKEGSQYQLKFSFTVSNNIVSGLKYTNVVWKTGLRVDNTKKMLGTYSPSQELYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTSYHFEIQKNWPTPI* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0882 238 MobiDBLite consensus disorder prediction 41 55 - -
Gso8g0882 238 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 4 237 - -
Gso8g0882 238 PRINTS RHO protein GDP dissociation inhibitor signature 94 109 IPR000406 GO:0005094|GO:0005737
Gso8g0882 238 PRINTS RHO protein GDP dissociation inhibitor signature 154 170 IPR000406 GO:0005094|GO:0005737
Gso8g0882 238 PRINTS RHO protein GDP dissociation inhibitor signature 171 186 IPR000406 GO:0005094|GO:0005737
Gso8g0882 238 PRINTS RHO protein GDP dissociation inhibitor signature 213 230 IPR000406 GO:0005094|GO:0005737
Gso8g0882 238 Pfam RHO protein GDP dissociation inhibitor 47 233 IPR000406 GO:0005094|GO:0005737
Gso8g0882 238 MobiDBLite consensus disorder prediction 32 56 - -
Gso8g0882 238 SUPERFAMILY E set domains 45 235 IPR014756 -
Gso8g0882 238 Gene3D Coagulation Factor XIII, subunit A, domain 1 58 236 IPR024792 -
Gso8g0882 238 PANTHER RHO GDP-DISSOCIATION INHIBITOR 4 237 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0882 Gso-Chr8 8212126 8213991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0882 K12462 - gmx:100780525 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1272 5 36263044 36265114 Gso8g0882 8 8212126 8213991 GST
Gso18g0038 18 357862 359789 Gso8g0882 8 8212126 8213991 PCT
Gso13g1584 13 31126810 31128667 Gso8g0882 8 8212126 8213991 PCT
Gso8g0882 8 8212126 8213991 Gso18g0038 18 357862 359789 PCT
Gso8g0882 8 8212126 8213991 Gso13g1584 13 31126810 31128667 PCT