Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1272 ATGTCTGCTGCTGTGTCTGCAACCAAGGATGTTCCCTTCAATGCTCATCTGGAGGAAGATATCAAAAACAAAGGAAGCAACAAGGTTGTTGGGGAAGCAGACCGGCTTCCTTACAATGATGATGCCGAAGGAACTGATTCAGAGACAGAGGAAGACCCCAAGTTGGAATTGGATCTTGGTCCTCAGTTTTCCCTCAGGGAACAGCTTGAGAAAGATAAAGATGATGAGAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAGGTATTGATGTGTCTGCTGTTGGAGAAAACAAAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATAATATGTCCAGGGAGGCCTGACCTCATTCTGCCAATTCCATTTACTTCTGAATCTAAGAATAGTATCTTCACCCTTAAGGAAGGAAGTCAATATCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCTGGCCTCAAATACACCAATGTTGTTTGGAAAACTGGGCTTAGAGTGGACAACACAAAAAAGATGTTGGGAACTTATAGCCCAAGCCAGGAACCATATACATATGAATTGGAAGAAGAAACTACCCCTTCGGGGTTGTTTGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCACAAATGCTACTTGGATACTAGTTACCACTTTGAAATTCAGAAGAATTGGTCTACACCCATCTAA 711 0.4262 MSAAVSATKDVPFNAHLEEDIKNKGSNKVVGEADRLPYNDDAEGTDSETEEDPKLELDLGPQFSLREQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICPGRPDLILPIPFTSESKNSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGLRVDNTKKMLGTYSPSQEPYTYELEEETTPSGLFARGTYSARTKFVDDDHKCYLDTSYHFEIQKNWSTPI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1272 236 MobiDBLite consensus disorder prediction 13 42 - -
Gso5g1272 236 Pfam RHO protein GDP dissociation inhibitor 45 231 IPR000406 GO:0005094|GO:0005737
Gso5g1272 236 PRINTS RHO protein GDP dissociation inhibitor signature 92 107 IPR000406 GO:0005094|GO:0005737
Gso5g1272 236 PRINTS RHO protein GDP dissociation inhibitor signature 152 168 IPR000406 GO:0005094|GO:0005737
Gso5g1272 236 PRINTS RHO protein GDP dissociation inhibitor signature 169 184 IPR000406 GO:0005094|GO:0005737
Gso5g1272 236 PRINTS RHO protein GDP dissociation inhibitor signature 211 228 IPR000406 GO:0005094|GO:0005737
Gso5g1272 236 SUPERFAMILY E set domains 43 233 IPR014756 -
Gso5g1272 236 MobiDBLite consensus disorder prediction 1 59 - -
Gso5g1272 236 PANTHER RHO GDP-DISSOCIATION INHIBITOR 4 235 IPR000406 GO:0005094|GO:0005737
Gso5g1272 236 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 4 235 - -
Gso5g1272 236 Gene3D Coagulation Factor XIII, subunit A, domain 1 56 234 IPR024792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1272 Gso-Chr5 36263044 36265114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1272 K12462 - gmx:100806852 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1272 5 36263044 36265114 Gso5g1272 5 36263044 36265114 ECH
Gso5g1272 5 36263044 36265114 Gso8g0882 8 8212126 8213991 GST
Gso18g0038 18 357862 359789 Gso5g1272 5 36263044 36265114 PCT
Gso13g1584 13 31126810 31128667 Gso5g1272 5 36263044 36265114 PCT
Gso5g1272 5 36263044 36265114 Gso18g0038 18 357862 359789 PCT
Gso5g1272 5 36263044 36265114 Gso13g1584 13 31126810 31128667 PCT