LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g1584	ATGTCTGCTGCTGTGTCCTCCACAACCTCTCATTTAGAGGAAGAGCTTAAAAACAACAACAACAACAACAACGTTGGTGGAGAGTCAGACCAGCCCCCTTACAATGAGGGTGCCAACTCTGATGTAGCTGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAAGTTGGAATCTAACAAAGAACTGGATCTTGGCCCTCAATTCACCCTCAAGGAACAGCTTGAGAAAGATAAAGATGATGTAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAGTGTTGACATGTCTGTCGTTGGAAGTGAAAGCAAAGACCCTGAAGTAAAGATATTGAGCCTCATTATTACAAGCCCAGACAAGCCTGACCTCACCCTTCCAATTCCATTTACTACTGATGCTAAGAAGAGTCTTTTCATCCTTAAGGAAGGAAGCAAATGCCAAATGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACAAATGTTGTTTGGAAAACTGGCGTTAGAGTGGACAGCAGAAAAAAGATGTTGGGAACTTTTAGTCCCAAGCAGGAACCATATACATTTGAATTGGAAGAAGAAACTATCCCTTCTGGCATGTTCGTCAGGGGAACCTATGCAGCAAGAACCAAGTTTGTAGATGACGATCGAAAATGCTACTTGGATGTCAGTTACTACTTTGAAATTCAGAAGAACAGACCAACACCTCAATGA	729	0.4225	MSAAVSSTTSHLEEELKNNNNNNNVGGESDQPPYNEGANSDVAEETEPEEDDDSKLESNKELDLGPQFTLKEQLEKDKDDVSLRKWKEQLLGSVDMSVVGSESKDPEVKILSLIITSPDKPDLTLPIPFTTDAKKSLFILKEGSKCQMKFTFTVSNNIVSGLKYTNVVWKTGVRVDSRKKMLGTFSPKQEPYTFELEEETIPSGMFVRGTYAARTKFVDDDRKCYLDVSYYFEIQKNRPTPQ*	243

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso13g1584	242	MobiDBLite	consensus disorder prediction	1	36	-	-
	Gso13g1584	242	MobiDBLite	consensus disorder prediction	1	68	-	-
	Gso13g1584	242	Pfam	RHO protein GDP dissociation inhibitor	49	237	IPR000406	GO:0005094\|GO:0005737
	Gso13g1584	242	PANTHER	RHO GDP-DISSOCIATION INHIBITOR	6	240	IPR000406	GO:0005094\|GO:0005737
	Gso13g1584	242	PRINTS	RHO protein GDP dissociation inhibitor signature	158	174	IPR000406	GO:0005094\|GO:0005737
	Gso13g1584	242	PRINTS	RHO protein GDP dissociation inhibitor signature	175	190	IPR000406	GO:0005094\|GO:0005737
	Gso13g1584	242	PRINTS	RHO protein GDP dissociation inhibitor signature	217	234	IPR000406	GO:0005094\|GO:0005737
	Gso13g1584	242	SUPERFAMILY	E set domains	43	237	IPR014756	-
	Gso13g1584	242	PANTHER	RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED	6	240	-	-
	Gso13g1584	242	Gene3D	Coagulation Factor XIII, subunit A, domain 1	58	239	IPR024792	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g1584	Gso-Chr13	31126810	31128667	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g1584	K12462		-	gmx:100793380	462.225

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso18g0038	18	357862	359789	Gso13g1584	13	31126810	31128667	GST
	Gso13g1584	13	31126810	31128667	Gso5g1272	5	36263044	36265114	PCT
	Gso13g1584	13	31126810	31128667	Gso8g0882	8	8212126	8213991	PCT
	Gso5g1272	5	36263044	36265114	Gso13g1584	13	31126810	31128667	PCT
	Gso8g0882	8	8212126	8213991	Gso13g1584	13	31126810	31128667	PCT