LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso18g0038	ATGTCTGCTGCTGTGTCCTCCACAACCCCTCATTTAGAGGAAGAGCTCAAAAACAAAGCAACAAACAACAAGAAGAAGAACAACGTTGGTGGGGAATCAGACCAGCCCCCTTACAATGATGGTGCCAACTCTGATGTTGCTGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAAGTTGGAATCTAACAAAGATTTGGATCTTGGCCCTCAATTCACTCTCAAGGAACAGCTTGAGAAAGACAAAGATGATGAAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAGTGTTGACATGTCTGTCGTTGGAAGTGAATGCAAAGACCCTGAAGTGAAGATATTGAGCCTCATTATTACAAGCCCAGATAAGCCTGACCTCACCCTGCCAATTCCATTTACTACTGATCCTAAGAAGAGTCTTTTCATCCTTAAGGAAGGAAGCAAATGCCAAATGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACAAACGTTGTTTGGAAAACTGGCGTTAGAGTGGACAGCAGAAAAAAGATGTTGGGAACTTTTAGTCCTCAGCAGGAACCATATACATTTGAATTGGAAGAAGAAACTATCCCTTCTGGCATGTTCGTCAGGGGAACCTATGCAGCAAGAACCAAGTTTGTAGACGACGATCGAAAATGCTACTTGGATGTCAATTACTACTTTGAAATTCAGAAGAACAGACCAACACCTCAATGA	741	0.4238	MSAAVSSTTPHLEEELKNKATNNKKKNNVGGESDQPPYNDGANSDVAEETEPEEDDDSKLESNKDLDLGPQFTLKEQLEKDKDDESLRKWKEQLLGSVDMSVVGSECKDPEVKILSLIITSPDKPDLTLPIPFTTDPKKSLFILKEGSKCQMKFTFTVSNNIVSGLKYTNVVWKTGVRVDSRKKMLGTFSPQQEPYTFELEEETIPSGMFVRGTYAARTKFVDDDRKCYLDVNYYFEIQKNRPTPQ*	247

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso18g0038	246	MobiDBLite	consensus disorder prediction	1	72	-	-
	Gso18g0038	246	SUPERFAMILY	E set domains	47	241	IPR014756	-
	Gso18g0038	246	Pfam	RHO protein GDP dissociation inhibitor	53	241	IPR000406	GO:0005094\|GO:0005737
	Gso18g0038	246	PANTHER	RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED	7	244	-	-
	Gso18g0038	246	Gene3D	Coagulation Factor XIII, subunit A, domain 1	62	243	IPR024792	-
	Gso18g0038	246	PANTHER	RHO GDP-DISSOCIATION INHIBITOR	7	244	IPR000406	GO:0005094\|GO:0005737
	Gso18g0038	246	MobiDBLite	consensus disorder prediction	23	40	-	-
	Gso18g0038	246	PRINTS	RHO protein GDP dissociation inhibitor signature	162	178	IPR000406	GO:0005094\|GO:0005737
	Gso18g0038	246	PRINTS	RHO protein GDP dissociation inhibitor signature	179	194	IPR000406	GO:0005094\|GO:0005737
	Gso18g0038	246	PRINTS	RHO protein GDP dissociation inhibitor signature	221	238	IPR000406	GO:0005094\|GO:0005737

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso18g0038	Gso-Chr18	357862	359789	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso18g0038	K12462		-	gmx:100797593	474.552

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso18g0038	18	357862	359789	Gso13g1584	13	31126810	31128667	GST
	Gso18g0038	18	357862	359789	Gso5g1272	5	36263044	36265114	PCT
	Gso18g0038	18	357862	359789	Gso8g0882	8	8212126	8213991	PCT
	Gso5g1272	5	36263044	36265114	Gso18g0038	18	357862	359789	PCT
	Gso8g0882	8	8212126	8213991	Gso18g0038	18	357862	359789	PCT