Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0870 ATGCAATTAGCGAATGAGAGAATGAAGAGCCGGTGGTTCGTGTGGCTTTTGGCGGTACTAGGCATCATCGGAGCCACACTCTTCATAGTGAGCTTGATCCAAACCTCGGAGAACAACTTCCTATGTTCCATAACAAGAACGATGCAGCAGCAGCAGCAGCAGTTCACCGATGGCCCCACATCGATGCAACTCAAAGCCATCCTCCACTACGCGACCTCTCAGATTGTCCCTCAACAATCTCTTTCCGAGATTACAATAACCTTCGACGTGCTCCAAAGCCTCCACCGCCCCGCCAACTTCCTCGTGTTTGGGCTGGGCCGCGATTCTCTCATGTGGGCCAGCCTCAACCCGCACGGCACCACCCTGTTCCTCGAGGAGGACCCTAAATGGTTCGGGATCGTCACCAAGGAGGCGCCCTACCTCCGGGCCCACACGGTCCGTTACCGTACACAGCTCCGAGAAGCCGACAGCCTCATGTCCTCGTACCGATCCGAACCCGCGTGTTTTCCGGCCACCGCCACGCTCCGCGGCAACGAGCGGTGCAAACTTGCCCTACATAACCTCCCTGACGAGGTTTATGAGAAGGAGTGGGATTTGATTATGATCGACGCGCCGAAGGGGTACTTCGCGGAGGCGCCGGGGCGCATGGCGGCGATATTCTCGGCGGCGGTGATGGCGAGGGACAGGAAGGGATCCGGTGTGACGCACGTGTTCTTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTACGCGGAGGAGTTTCTGTGTAGGAAGCACTTGGTCAAAGGTGTTGGGAGGCTCTGGCATTTCGAGATTCCTCCAATGGGTAATAACACTCGTGACTACGCACGTTTCTGTTAG 861 0.5668 MQLANERMKSRWFVWLLAVLGIIGATLFIVSLIQTSENNFLCSITRTMQQQQQQFTDGPTSMQLKAILHYATSQIVPQQSLSEITITFDVLQSLHRPANFLVFGLGRDSLMWASLNPHGTTLFLEEDPKWFGIVTKEAPYLRAHTVRYRTQLREADSLMSSYRSEPACFPATATLRGNERCKLALHNLPDEVYEKEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKHLVKGVGRLWHFEIPPMGNNTRDYARFC* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0870 286 Gene3D Vaccinia Virus protein VP39 76 284 IPR029063 -
Gso8g0870 286 Pfam Polysaccharide biosynthesis 83 270 IPR021148 -
Gso8g0870 286 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 64 286 IPR006514 GO:0045492
Gso8g0870 286 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 11 286 - -
Gso8g0870 286 PANTHER OS11G0490100 PROTEIN 11 286 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0870 Gso-Chr8 8092577 8094085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0870 - - gmx:100820087 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1255 5 36114353 36115517 Gso8g0870 8 8092577 8094085 GST
Gso18g0051 18 455556 456869 Gso8g0870 8 8092577 8094085 PCT
Gso13g1570 13 31022192 31023537 Gso8g0870 8 8092577 8094085 PCT
Gso8g0870 8 8092577 8094085 Gso18g0051 18 455556 456869 PCT
Gso8g0870 8 8092577 8094085 Gso13g1570 13 31022192 31023537 PCT