Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0051 ATGTTCCATAACACAACACGCACATACATAATTAACACCATATCTCACCTCACCTTATCACACACATGCAACAACACAAAGGTAACAAGGAGCTTTAAAAAACAAATGATGAAGAACCGTTATCCGTTGCCGGAGAGACGGTGGTTCGTGGCTATGGCCGTCGTGGGCTTGATCGCCACGGCGATGTTCCTCACCAACGCGATCCGAACCTCGGAAACCTCGTACTTGTGCCCGGGCGCGCTCGGGATCCGAAGCAAAACCCGAACCGAATTCAGCTACGACGCGTCACCGATCCAGCTCCGCGCGATTCTCCACTACGCGACCTCGCGCGTGGTTCCGCAACAATCGGTGTCGGAGATCAAGATCAGTTTGGACGTGATTAAATCACTGGGCCGGCCCATTAACTTCCTCGTCTTCGGGCTGGGCCACGACTCCCTCATGTGGGCCTCATTCAACCCGGGCGGCACCACTGTGTTCCTCGAGGAGGACCCGAAGTGGGTCCACTCGATCCTTAAAGACGCGCCGGGCCTGCGGGCCCATACTGTGCGTTACCGCACGCAGCTACGCGACGCGAAGGGGCTTCTCACCTCGTACCGCTCCGAACCTTCGTGTTCTCCCACGAAGGCGTACCTGCGAGGCAACGAAGCGTGCAAGCTGGCGCTGGAGAATCTTCCCGACGAGGTTTACGAGACCGAGTGGGACTTGATAATGATTGACGCGCCGAAGGGGTATTTCGCGGAGGCGCCGGGGAGGATGGCGGCGGTGTTCTCCGCCGCGGTGATGGCGAGGAACAGGAAGGGATCGGGTGTGACGCACGTGTTTTTGCATGACGTGGATCGGAAGGTGGAGAAGGTGTACGCGGAGGAGTTTCTTTGTAGGAAGAACTTGGTCAAGGGTGTTGGAAGGCTTTGGCACTTCCAGATACCTCCTTCTAACGACACACATGCTTCTCGTTTCTGCTAG 963 0.568 MFHNTTRTYIINTISHLTLSHTCNNTKVTRSFKKQMMKNRYPLPERRWFVAMAVVGLIATAMFLTNAIRTSETSYLCPGALGIRSKTRTEFSYDASPIQLRAILHYATSRVVPQQSVSEIKISLDVIKSLGRPINFLVFGLGHDSLMWASFNPGGTTVFLEEDPKWVHSILKDAPGLRAHTVRYRTQLRDAKGLLTSYRSEPSCSPTKAYLRGNEACKLALENLPDEVYETEWDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKNLVKGVGRLWHFQIPPSNDTHASRFC* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0051 320 Pfam Polysaccharide biosynthesis 119 306 IPR021148 -
Gso18g0051 320 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 101 320 IPR006514 GO:0045492
Gso18g0051 320 PANTHER OS11G0490100 PROTEIN 37 320 IPR006514 GO:0045492
Gso18g0051 320 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 37 320 - -
Gso18g0051 320 Gene3D Vaccinia Virus protein VP39 111 318 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0051 Gso-Chr18 455556 456869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0051 - - gmx:100791951 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0051 18 455556 456869 Gso13g1570 13 31022192 31023537 GST
Gso18g0051 18 455556 456869 Gso5g1255 5 36114353 36115517 PCT
Gso18g0051 18 455556 456869 Gso8g0870 8 8092577 8094085 PCT
Gso5g1255 5 36114353 36115517 Gso18g0051 18 455556 456869 PCT
Gso8g0870 8 8092577 8094085 Gso18g0051 18 455556 456869 PCT