Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1255 ATGAAGAGCCGATGGCTAGTGTGGCTATTGGCGATACTGGGCGTCATCGGAGCCACACTCTTCATAGCAAGCATGATCCAAACCTGGGAGAACAACTTCCTATGTTCCATAAGCAGAACCATGCAGCAGCAACAGTTCACCCACGGTCCCACATCGATGCAACTCAAGGCCATCCTCCACTACGCCACCTCGCAGGTTGTCCCTCAACAATCTCTCTCGGAGATCACCATAACCTTCGACGTGCTCCAGGCCCTCCACCGGCCCGCCAACTTCCTCGTCTTCGGGCTGGGCCGAGACTCGCTCATGTGGGCCAGCCTCAACCCGCACGGCACCACGCTGTTCCTCGAGGAGGACCCTAAGTGGTTCGGGATCGTCACCAAGGACGCGCCGAACCTCCTGGCCCACACGGTCCGTTACCGGACCCAGCTCCGAGACGCCGACAGCCTCCTCTCCTCGTACAGCTCCGAACCCGCGTGTTTTCCGGCGACCGCCACGCTCCGCGGCAACGAGCGTTGCAAGCTCGCCCTACACAACCTCCCTGACGAGGTGTATGCTAAAGAGTGGGATTTGATTATGATCGACGCGCCGAAGGGGTACTTCGCGGAGGCGCCGGGGCGCATGGCGGCGATATTCTCGGCGGCGGTGATGGCGAGGGACAGAAAAGGATCCGGTGTGACACACGTGTTTTTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTACGCGGAGGAGTTTCTGTGTAGGAAGCACTTGGTCAAAAGTGTTGGGAGGCTCTGGCACTTCCAGATTCCTCCCATGGGTAATCACACGAGTGATTACACACGCTTCTGTTAG 834 0.5863 MKSRWLVWLLAILGVIGATLFIASMIQTWENNFLCSISRTMQQQQFTHGPTSMQLKAILHYATSQVVPQQSLSEITITFDVLQALHRPANFLVFGLGRDSLMWASLNPHGTTLFLEEDPKWFGIVTKDAPNLLAHTVRYRTQLRDADSLLSSYSSEPACFPATATLRGNERCKLALHNLPDEVYAKEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKHLVKSVGRLWHFQIPPMGNHTSDYTRFC* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1255 277 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 8 277 - -
Gso5g1255 277 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 55 277 IPR006514 GO:0045492
Gso5g1255 277 Gene3D Vaccinia Virus protein VP39 65 275 IPR029063 -
Gso5g1255 277 Pfam Polysaccharide biosynthesis 74 261 IPR021148 -
Gso5g1255 277 PANTHER OS11G0490100 PROTEIN 8 277 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1255 Gso-Chr5 36114353 36115517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1255 - - gmx:100786348 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1255 5 36114353 36115517 Gso8g0870 8 8092577 8094085 GST
Gso18g0051 18 455556 456869 Gso5g1255 5 36114353 36115517 PCT
Gso13g1570 13 31022192 31023537 Gso5g1255 5 36114353 36115517 PCT
Gso5g1255 5 36114353 36115517 Gso18g0051 18 455556 456869 PCT
Gso5g1255 5 36114353 36115517 Gso13g1570 13 31022192 31023537 PCT