Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1570 ATGAAGAACCGTTATTTGGTGCCGGAGAGACGGTGGTTCGTGGGTCTGGCCGTCGTGGGGTTGATCGGCGCGGTGCTATTCCTCAGCAACGCGATCCGAACCTCGGAAACCTCGTACGTGTGTCCGGGGGCGCTCGGGATCCGAAGCAAGACCCGAACCGAATTCAGTTACGACGCGTCACCGATCCAGCTCCGCGCGATTATGCACTACGCGACCTCGCGCGTGGTTCCGCAACAATCGGTGTCGGAGATCAAGATCAGTCTGGACGTCATTAAATCACTGGGCCGGCCCATCAACTTCCTCGTCTTCGGGCTGGGCCACGACTCCCTCATGTGGGCCTCGTTCAACCCGGGCGGCACCACGGTGTTCCTCGAAGAAGATCCAAAGTGGGTCCACTCGATCCTTAAAGACGCGCCTGGCCTGCGGGCCCACACGGTGCGTTACCGCACGCAGCTACGCGACGCCAAGGGGCTTATCACCTCGTACCGCTCCGAACCTTCGTGTTCTCCCACGAAGGCGTACCTGCGAGGCAACGAAGCGTGCAAGCTGGCGCTGGAGAATTTGCCCGACGAGGTTTACGAGACCGAGTGGGACATGATCATGATCGACGCGCCGAAGGGGTATTTCGCGGAGGCGCCGGGGAGGATGGCGGCGGTGTTCTCCGCCGCGGTGATGGCGAGGAACAGGAAGGGATCCGGTGTGACGCACGTGTTTTTGCATGACGTGGATCGGAAGGTGGAGAAGGTGTACGCCGAAGAGTTTCTCTGTAAAAAGAACTTGGTCAAGGGTGTTGGAAGGCTTTGGCACTTCGAGATACCTCCTTCTAACGACACACGTGCTTCTCGTTTCTGCTAG 855 0.5942 MKNRYLVPERRWFVGLAVVGLIGAVLFLSNAIRTSETSYVCPGALGIRSKTRTEFSYDASPIQLRAIMHYATSRVVPQQSVSEIKISLDVIKSLGRPINFLVFGLGHDSLMWASFNPGGTTVFLEEDPKWVHSILKDAPGLRAHTVRYRTQLRDAKGLITSYRSEPSCSPTKAYLRGNEACKLALENLPDEVYETEWDMIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRKVEKVYAEEFLCKKNLVKGVGRLWHFEIPPSNDTRASRFC* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1570 284 Gene3D Vaccinia Virus protein VP39 74 282 IPR029063 -
Gso13g1570 284 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 284 - -
Gso13g1570 284 Pfam Polysaccharide biosynthesis 83 270 IPR021148 -
Gso13g1570 284 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 65 284 IPR006514 GO:0045492
Gso13g1570 284 PANTHER OS11G0490100 PROTEIN 1 284 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1570 Gso-Chr13 31022192 31023537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1570 - - gmx:100789499 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0051 18 455556 456869 Gso13g1570 13 31022192 31023537 GST
Gso13g1570 13 31022192 31023537 Gso5g1255 5 36114353 36115517 PCT
Gso13g1570 13 31022192 31023537 Gso8g0870 8 8092577 8094085 PCT
Gso5g1255 5 36114353 36115517 Gso13g1570 13 31022192 31023537 PCT
Gso8g0870 8 8092577 8094085 Gso13g1570 13 31022192 31023537 PCT