Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0868 ATGAGAACAAGGAGAGGTGCGTGTTATCCTGGTGTAGTCTCAAGGATGTGCTCCAATGTGAGGGTTACGAAGAAAAAAAGCAAGGATCTGCACATGCATATGCATGTTCCTGCCGGAGACTCCATTATTTATAGCCGGAAAAAGCAGAAGAAAACGCCGGAAAAACTCGCCGCCGGTCGTTACGATTTTTTCGAGTCCTTGCCGGATGACCTCGTAATCTCCATCTTCTGCAAGCTTAGTTCCACCGCCACTAAACCTTCCGATTTCGTCAATGTTTTAATCACGTCTAAAAGATTAAACAGATTAGCACTTCATTCGCTTGTATTATCCAAAGCCTCGCCGAGAACTTTCACTATTAAAGCAAAATATTGGTGCGATTCGGCACACAAATTCCTCAAACACTGTGCCGATGCCGGAAACATTGAAGCTTGCTATACTTTAGGCATGATTCGGTTCTACTGTTTGCAAAACCGAGGGAGCGGCGCGTCGTTGATGGCGAAGGCGGCGATTAACTCTCACGCGCGGGCTCTCTACGCGCTGGCCGTGATTCAGTTCAACGGAAGCGGGGGCACGAAGAGCGACAAGGACCTACGCGCCGGCGTGGCGCTATGCGCAAGAGCAGCGTTTCTCGGACACGTCGACGCGCTGCGCGAGCTCGGCCACTGCCTACAGGACGGTTACGGCGTACGGCAGAACATCGCCGAGGGACGGCGGTTCCTCGTGCAGGCCAACGCGCGTGAGCTCTCCGCCGTGCTGTCCACCGGCGCCGCCGCGCGTACCTTGCTGAGTTGGAATCTTCAGCCGCAGCAGCTCCGGCAGGGGTCCGGGTGTCCGCTTCTCAGCGATTTCGGATGCAACGTGCCGGCGCCGGATGTGCATCCGGCGAGCCTGTTCATGACTGAGTGGTTCGCCGCTCGCGGCGGTTCTCCGGGACCGGGGCTGAGACTCTGTTCTAACGCGGGGTGCGGGAGGCCCGAGACGAGGAAGCACGAGTTTCGAAGGTGTTCTGTGTGCGGCGAGGTGAATTATTGCTCACGCGCGTGCCAAGCGCTTGATTGGAAGTTCCGGCACAAAGCGGAGTGCGCCCCCGTGGAGCGATGGCTCGACGAGGACGGCGAAGATGTCGGTAACGACGACGGTGACGGAGAGGTCGAGGTTGTTATGGTAGATAGTTAG 1176 0.5646 MRTRRGACYPGVVSRMCSNVRVTKKKSKDLHMHMHVPAGDSIIYSRKKQKKTPEKLAAGRYDFFESLPDDLVISIFCKLSSTATKPSDFVNVLITSKRLNRLALHSLVLSKASPRTFTIKAKYWCDSAHKFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAINSHARALYALAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELSAVLSTGAAARTLLSWNLQPQQLRQGSGCPLLSDFGCNVPAPDVHPASLFMTEWFAARGGSPGPGLRLCSNAGCGRPETRKHEFRRCSVCGEVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDVGNDDGDGEVEVVMVDS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0868 391 Gene3D Tetratricopeptide repeat domain 103 275 IPR011990 GO:0005515
Gso8g0868 391 SUPERFAMILY HIT/MYND zinc finger-like 317 366 - -
Gso8g0868 391 Pfam MYND finger 320 361 IPR002893 -
Gso8g0868 391 ProSiteProfiles Zinc finger MYND-type profile. 319 361 IPR002893 -
Gso8g0868 391 SUPERFAMILY F-box domain 54 120 IPR036047 GO:0005515
Gso8g0868 391 SUPERFAMILY HCP-like 126 243 - -
Gso8g0868 391 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 44 391 - -
Gso8g0868 391 Gene3D - 313 365 - -
Gso8g0868 391 PANTHER MYND DOMAIN-CONTAINING 44 391 IPR044508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0868 Gso-Chr8 8063738 8065593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0868 - - gmx:100819013 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1254 5 36079656 36081491 Gso8g0868 8 8063738 8065593 GST
Gso18g0056 18 494687 496532 Gso8g0868 8 8063738 8065593 PCT
Gso13g1566 13 30984145 30985952 Gso8g0868 8 8063738 8065593 PCT
Gso8g0868 8 8063738 8065593 Gso18g0056 18 494687 496532 PCT
Gso8g0868 8 8063738 8065593 Gso13g1566 13 30984145 30985952 PCT