Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0846 ATGCCTCCTTCACAATTCCCTCTTCGTTGGGAGAGCACAGGAGACCGATGGTGGTATGCATCTCCAATTGATTATGCTGCTGCAAATGGCCTCTATGATCTGGTCACTGAGCTTCTCCACCTTGACACCAACCTCCTCATTAAGCTCACTTCCCTTCGTCGAATTCGCCGCCTAGAAGCCGTGTGGGACAACGAGTCCAAGTTTGAGGATGTTGCCAGGTGCCGGTCCAAGGTTGCAAGGAATCTTATGATTGAGTGTGAGACAGGAAGAGGGCATAAGCATAACTCTCTCATCCTTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCGGCCGGGGATGTGGACTTTGTTCTTGAGTTGTTGGGGAGAGACCCTCTTTTGGTGTTTGGTGAGGGAGAGTATGGTGTCACTGATATGTTTTATGCTGCAGCCAGGGGAAAGAACTGTGAGGTCTTTAAGCTGCTGCTTCGTTCTGCTCTTTCAAGAAAGGAGTGCCTTGGTGGAAGTGAAGCAGAATTGGAAGAGAAGTTGGATGAGGGTTCTAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCATCCATGCTGCTGCCAGGGGAGGGAATTGGGAAATACTGAAGCAGATTCTAGCAAGTGTTTCTGTTTCTCAGGTTTTGTCTTATAGAGATTCACAAGGATGTACTGTCTTGCATGCAGCAGCTGCAAGAGGCCAAGTTGAGGTGGTGAGAAATCTAATTGAATCCTATGATATCATCAACTCAGCTAATGCTCAAGGCAATACAGCATTACATGTGGCCTCTTACAGAGGTTACTTACCCGTGGTAGAGATTCTGATTGGAGCATCTCACTCGTTAGCAACGTTAACCAATCACTATGGAGATACTTTTCTTCACATGGCAGTGGTTGGTTTCAGAAGCCCTGGTTTCTGTAGACTGGACAAGCACACTGAGCTCATGAAGCAACTGACAAGTGAAAAAATTGTGAAAATGAAGGATATCATCAATGTCAGGAACAATGATGGAAGAACAGCTCTTCATGTTGCTGTGGTTCATAATATCCAATTTGATGTAGTGGAATTACTGATGTCTGTTCCATCAATTGATTTGAACATTTGCGATGCTGATGGGATGACACCTTTGGATCATCTTAGACAAAAATCACGATCAGTGTCTTCTGAAATCTTAATCAAGCAATTAATTTCAGCTGGAAGGATCTCTAATTATCAGGACTATGTGACAAGAAATGCCCTTGTTAAGCATCTTAGGACTCATGGTATTGGAGGCAGTCCTGGAACATCATTTAGAATACCAGATTCTGAGATATTGTTGTACACAGGCATTGAGAATTCATGTGATGACAATTATGATCAGGCAAGTGTAGAATCAAATTCATGGTCAAGTGAAATAAACAATTATGACTCGGCCAATTCGCCATGTAACAGCAAGTCTAGTTCTGTCAATTATGGGGCAAGGCACCTAAAGTTTCTGCTCCAAAGTTCTAGAAGAAGAGACACAAAAGAGGCAGCCTCAGATTTAGAAGATGATGTTTCTGTGAATTCTTTCAGCTCAAGGAACAACTTGGAAGACTTTCCAATTCCATTGAGGCAAAGATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTATCTTCCAAGTCCTACAGCCAAAAAATATTTTCATGCAGGTCTAACGCAAGGCGTGATTAAGGTAAAGCCACAAGTGCCTCTACCTGTTCATTCAACATCTAATCTTTTTCAAAAACTATCTATCTCTTCTAATTCTACGAATAATAAGCAAAAACGTGTTGATATAATGGGACCCTCTTGCTCCAATCGACCAATGGATGGGGGTGGCACCCTACAGTTGAACTTTAAGCAGGGCACTTTCAATAGGAGATTGATGAACCGGTACTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAATGTCAAATTGCAGTTCTAAGCATTTTAGTTCTTTAGTTGCATAA 2031 0.4264 MPPSQFPLRWESTGDRWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDNESKFEDVARCRSKVARNLMIECETGRGHKHNSLILAGYGGWLLYTAASAGDVDFVLELLGRDPLLVFGEGEYGVTDMFYAAARGKNCEVFKLLLRSALSRKECLGGSEAELEEKLDEGSKVFKRDVMNRAIHAAARGGNWEILKQILASVSVSQVLSYRDSQGCTVLHAAAARGQVEVVRNLIESYDIINSANAQGNTALHVASYRGYLPVVEILIGASHSLATLTNHYGDTFLHMAVVGFRSPGFCRLDKHTELMKQLTSEKIVKMKDIINVRNNDGRTALHVAVVHNIQFDVVELLMSVPSIDLNICDADGMTPLDHLRQKSRSVSSEILIKQLISAGRISNYQDYVTRNALVKHLRTHGIGGSPGTSFRIPDSEILLYTGIENSCDDNYDQASVESNSWSSEINNYDSANSPCNSKSSSVNYGARHLKFLLQSSRRRDTKEAASDLEDDVSVNSFSSRNNLEDFPIPLRQRYSKMCSLPNNKRTLSIRTYLPSPTAKKYFHAGLTQGVIKVKPQVPLPVHSTSNLFQKLSISSNSTNNKQKRVDIMGPSCSNRPMDGGGTLQLNFKQGTFNRRLMNRYFSFGAHGQALEDANSCTMSNCSSKHFSSLVA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0846 676 Pfam Ankyrin repeat 341 374 IPR002110 GO:0005515
Gso8g0846 676 SUPERFAMILY Ankyrin repeat 106 390 IPR036770 -
Gso8g0846 676 SMART ANK_2a 226 255 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 190 220 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 259 288 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 376 409 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 102 131 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 341 372 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 136 166 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 18 47 IPR002110 GO:0005515
Gso8g0846 676 SMART ANK_2a 293 333 IPR002110 GO:0005515
Gso8g0846 676 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 671 - -
Gso8g0846 676 Pfam Ankyrin repeats (3 copies) 195 282 IPR002110 GO:0005515
Gso8g0846 676 ProSiteProfiles Ankyrin repeat region circular profile. 226 248 - -
Gso8g0846 676 ProSiteProfiles Ankyrin repeat profile. 259 291 IPR002110 GO:0005515
Gso8g0846 676 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 671 - -
Gso8g0846 676 ProSiteProfiles Ankyrin repeat profile. 226 258 IPR002110 GO:0005515
Gso8g0846 676 Gene3D - 12 424 IPR036770 -
Gso8g0846 676 ProSiteProfiles Ankyrin repeat region circular profile. 259 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0846 Gso-Chr8 7863216 7866615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0846 196 382 Miscellaneous Gene Families AT2G31820 34.043 1.76e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0846 - - gmx:100811195 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1232 5 35844678 35848050 Gso8g0846 8 7863216 7866615 GST
Gso18g0083 18 697783 701144 Gso8g0846 8 7863216 7866615 PCT
Gso13g1538 13 30795942 30799365 Gso8g0846 8 7863216 7866615 PCT
Gso8g0846 8 7863216 7866615 Gso18g0083 18 697783 701144 PCT
Gso8g0846 8 7863216 7866615 Gso13g1538 13 30795942 30799365 PCT