Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1538 ATGCCTCCTTATTTGCCTCTTCGGTGGGAGAGTACGGGAGAACAATGGTGGTATGCATCTCCCATTGATTGCGCCGCCGCGAATGGCCACTATGATCTGGTGGTGGAGCTTCTCCATCTGGACGCTAACCTCCTCATCAAGCTCACTTCCCTACGCAGAATCCGCCGCCTGGAAACCGTGTGGGACGACGAGAAACACTTCGAGGACGTCGCGAAATGCCGCTCACAGGTTGCCAGGAATCTGATGCTGGAATGCGAGGCAGGAAGAGCACACAATTCTCTCATTCGCGCCGGCTACGGCGGGTGGCTACTCTACACTGCTGCCTCGGCCGGTGACGTGGATTTCGTTAAGGAGCTGTTGGGGAAGTACCCTGCTCTCGTGTTTGGTGAAGGAGAGTATGGAGTCACTGATATACTGTATGCTGCTGCGAGGAGCAATTCTTGCGAGGTGTTTGAGCTTCTGCTTCGTTCTGCTCTCTCGCCGCCGCAAATGGAGGATGTTTATGAGAGGGACATGATGAATAGAGCGGTTCATGCTGCTGCCAGAGGAGGGAACTGGGAGATGCTGAAACGGCTTGTGAGGAACGGTTCTGGCGTTTTGGGGTTTAGAGATACTCAAGGATGCACTGTTCTTCATACTGCAGCTGCTAGAGGACAGGTTGAGGTGGTGAGAAATCTACTTGCATCATTTGATGTTGTAAACTTAACAGATGATCAAGGGAACACAGCATTACATATAGCTTCTTACGGGGGTCACTTACCAGTGGTTGAGATTCTGATTCTTGCGTCTCCCTCGCTAGCATTGTTTACCAATCACTACGGAGATACTTTTCTTCATATGGCGGTGGCTGGTTTCAGAAGTCCCGGTTTCCGTAGACTGGACAAGCACACTGAGCTCATGAAGCGATTGGTAAGTGGAAAGATTGTGAACTTACGGGACATTATCAATGTTAAGAACAACGATGGAAGAACGGCTCTTCATGTATCCGTGATTGATAATATTCAATGTGAACAAGTGGAATTGTTGATGTCTGTGTCATCAATTGATTTGAACATTTGTGATGCTGATGGGATGACCCCTTTGGATCTTTTAAAGCAAAGGGCGCGATCAGCATCATCTGATATTCTAATCAAGCAAATGATTTCCTCTGGAGGGGTCTCTAAATGTCTGGATGTTGTGGCAGGAAATGCCCTTTGCACTCATCAAAAAGCTCATGTCATTGGAGGCAGTCCTGGAACTTCATTTAGAATACCAGATGCAGAGATATTCTTGTACACTGGCATTGAGAATTCATCAGACGCCACCAATTATGATCAAGCAAGTGTGGAATCATATTCCTGCTCAAACGAACTAAACAATTCTGACTCAGCCAATTCCCCACATAACAAGAAGTCTAATTCTGTCAATGCAAGGCGCTCAAAGTTTCGTCTCCACTGGCCTAGGAGAAGAGAGACAAAAGCAGCTGCCTCAGAATTGGAAGATGATGATGATTCTCATGATCCTTTCAGTTCAAGTAGAAACCTGGAAGAGTTTCCAATCCCGTTGCGGCAAAGATACTCACAACCATGCTCCCTTCCAAACAACAAAAGAACACAACCTATGAGGACTTCTCTTCCTAGCCCATCCTCCAATGTGAAATTCAGTGCAGGCTTAATGCAAGGTGTAATTCAGCTAAAGCCACATTCTGCTCATTCAACTCCTAGTCCTTTCCAGGAATTATCAGTGTCTTCTCTTTCATACATCAAGAAACAAAAGGGTGTTGAAATAATGGGACCCTCTTGCTCTAATCGATCAATAGATGACGGCACACTTCTATTGAACTACAAACAGTGTTCCTTCAATAAGAAATTGATGAATGGGTATTTTTCTTTTGGAGCACAGGGCCTTGCTGTTGAAGATTCCAATAGCTGCGCAAAGTCAAACAGCAGCTACAAACGTTTAAGTTCCATAGTTGCCTAA 1959 0.4604 MPPYLPLRWESTGEQWWYASPIDCAAANGHYDLVVELLHLDANLLIKLTSLRRIRRLETVWDDEKHFEDVAKCRSQVARNLMLECEAGRAHNSLIRAGYGGWLLYTAASAGDVDFVKELLGKYPALVFGEGEYGVTDILYAAARSNSCEVFELLLRSALSPPQMEDVYERDMMNRAVHAAARGGNWEMLKRLVRNGSGVLGFRDTQGCTVLHTAAARGQVEVVRNLLASFDVVNLTDDQGNTALHIASYGGHLPVVEILILASPSLALFTNHYGDTFLHMAVAGFRSPGFRRLDKHTELMKRLVSGKIVNLRDIINVKNNDGRTALHVSVIDNIQCEQVELLMSVSSIDLNICDADGMTPLDLLKQRARSASSDILIKQMISSGGVSKCLDVVAGNALCTHQKAHVIGGSPGTSFRIPDAEIFLYTGIENSSDATNYDQASVESYSCSNELNNSDSANSPHNKKSNSVNARRSKFRLHWPRRRETKAAASELEDDDDSHDPFSSSRNLEEFPIPLRQRYSQPCSLPNNKRTQPMRTSLPSPSSNVKFSAGLMQGVIQLKPHSAHSTPSPFQELSVSSLSYIKKQKGVEIMGPSCSNRSIDDGTLLLNYKQCSFNKKLMNGYFSFGAQGLAVEDSNSCAKSNSSYKRLSSIVA* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1538 652 MobiDBLite consensus disorder prediction 467 481 - -
Gso13g1538 652 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 648 - -
Gso13g1538 652 Pfam Ankyrin repeats (3 copies) 178 260 IPR002110 GO:0005515
Gso13g1538 652 ProSiteProfiles Ankyrin repeat region circular profile. 239 260 - -
Gso13g1538 652 ProSiteProfiles Ankyrin repeat region circular profile. 206 227 - -
Gso13g1538 652 MobiDBLite consensus disorder prediction 448 466 - -
Gso13g1538 652 ProSiteProfiles Ankyrin repeat profile. 206 238 IPR002110 GO:0005515
Gso13g1538 652 SUPERFAMILY Ankyrin repeat 104 377 IPR036770 -
Gso13g1538 652 MobiDBLite consensus disorder prediction 520 543 - -
Gso13g1538 652 MobiDBLite consensus disorder prediction 482 504 - -
Gso13g1538 652 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 648 - -
Gso13g1538 652 MobiDBLite consensus disorder prediction 448 543 - -
Gso13g1538 652 ProSiteProfiles Ankyrin repeat profile. 239 271 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 273 313 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 321 352 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 99 128 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 17 46 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 239 268 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 133 163 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 172 202 IPR002110 GO:0005515
Gso13g1538 652 SMART ANK_2a 206 235 IPR002110 GO:0005515
Gso13g1538 652 Gene3D - 10 385 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1538 Gso-Chr13 30795942 30799365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1538 104 363 Miscellaneous Gene Families AT2G31820 32.331 3.45e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1538 - - gmx:100796359 1290.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0083 18 697783 701144 Gso13g1538 13 30795942 30799365 GST
Gso13g1538 13 30795942 30799365 Gso5g1232 5 35844678 35848050 PCT
Gso13g1538 13 30795942 30799365 Gso8g0846 8 7863216 7866615 PCT
Gso5g1232 5 35844678 35848050 Gso13g1538 13 30795942 30799365 PCT
Gso8g0846 8 7863216 7866615 Gso13g1538 13 30795942 30799365 PCT