Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0061 ATGGAAACAGTGAGGACTAGAGAAGGAGCAATAGCCAAAGACACCACTGAAACTGAACTCACCAAAATCCCTCTCCTCCGGGCAACTGTTGAAACACTTCATCCCTCTTCCAAGGAAGAGGATGATTTTATGATTAGAAGATTCCTGCGTGCTCGTGATTTAGATGTAGAGAAGGCTTCGGCAATGTTCCTCAAGTACTTGAAATGGAGACATGAATTTGTTCCAAATGGTTCTGTATCAGTGTCTGATGTTCCTATCGAACTTGCACAGGATAAGGTGTTCATGCAAGGACGCGACAAGATAGGTCGACCTATACTTATTGTCTTTGGTAGAAGGCATTTTCAGAACAAAGATGGTCTAGATGAATTCAAACGGTTTGTTGTTTATGTTCTTGATAAAGTATGTGCGAGTATGCCACCTGGGCAAGAAAAGTTTGTTGGTATAGCAGAACTGAAGGGATGGGGATACTCAAACAGTGACGTGCGTGGATACCTTAGTGCTCTATCCATTTTGCAGGATTACTACCCTGAGAGATTGGGAAAGTTGTTTATTGTGAATGCACCATACATTTTTATGAAAGTGTGGAAAATTATTTACCCATTCATTGACAACAAAACCAAGAAGAAGATAGTATTTGTGGAAAAAAATAAGGTGAAATCAACACTGCTAGAAGAGATGGACGAAAGTCAGGTCCCAGAGATATTCGGTGGCTCACTGTCATTGGTCCCAATTCAGGATGCTAATTAA 747 0.4083 METVRTREGAIAKDTTETELTKIPLLRATVETLHPSSKEEDDFMIRRFLRARDLDVEKASAMFLKYLKWRHEFVPNGSVSVSDVPIELAQDKVFMQGRDKIGRPILIVFGRRHFQNKDGLDEFKRFVVYVLDKVCASMPPGQEKFVGIAELKGWGYSNSDVRGYLSALSILQDYYPERLGKLFIVNAPYIFMKVWKIIYPFIDNKTKKKIVFVEKNKVKSTLLEEMDESQVPEIFGGSLSLVPIQDAN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0061 248 PANTHER OS03G0850700 PROTEIN 9 247 - -
Gso8g0061 248 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 243 IPR001251 -
Gso8g0061 248 Pfam CRAL/TRIO domain 92 237 IPR001251 -
Gso8g0061 248 SMART CRAL_TRIO_N_2 41 66 IPR011074 -
Gso8g0061 248 SMART sec14_4 87 240 IPR001251 -
Gso8g0061 248 SUPERFAMILY CRAL/TRIO N-terminal domain 13 76 IPR036273 -
Gso8g0061 248 Pfam CRAL/TRIO, N-terminal domain 38 64 IPR011074 -
Gso8g0061 248 Gene3D - 6 246 IPR036865 -
Gso8g0061 248 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 9 247 - -
Gso8g0061 248 CDD SEC14 93 237 IPR001251 -
Gso8g0061 248 SUPERFAMILY CRAL/TRIO domain 85 240 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0061 Gso-Chr8 563227 568515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0061 26 233 Acyl Lipid Metabolism Gene Families AT5G47730 28.125 4.53e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0061 - - gmx:100796822 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1702 5 40271882 40280986 Gso8g0061 8 563227 568515 GST
Gso8g0061 8 563227 568515 Gso4g1707 4 47094603 47097463 PCT
Gso8g0061 8 563227 568515 Gso6g1384 6 13571958 13574997 PCT
Gso4g1707 4 47094603 47097463 Gso8g0061 8 563227 568515 PCT
Gso6g1384 6 13571958 13574997 Gso8g0061 8 563227 568515 PCT