Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1384 ATGGAAGGTGTGAGCCCTGAGCCCTTGAGATCAGAATTGGATTCCAAATCCAAACAAGACACGGCGAAAGAAGAAGATGACAACACATTCAAAGAAAGCACTGACGCCGAGGTCACTAAAATTCGTCTCATGAGAGCCTTTGTTGAAAGCCGAGATCCCTCTTCCAAGGAAGTAGATGATTTGATGATTAGAAGATTCTTGCGGGCTCGTAGTTTAGATGTGGAGAAGGCTTCGGCAATGTTCCTTAAGTACTTGAAATGGAAGCGTTCATTTGTTCCAAATGGTTACATATCACCGTCAGAGATTGCCGAAGATATTGCACAGGACAAGGTGTTTACGCAAGGCCTCGACAAGAAAGGTCGACCTATAGTTGTTGCCTTTGCTGCAAAACATTTTCAAAGCAAAAATGGTGCCGATGGTTTCAAACGGTACGTAGTCTTTGTTCTTGAGAAGCTTTGTTCAAGGATGCCACCAGGACAAGAAAAGTTTCTTGCCATTGCAGACATTAAAGGATGGGCATACGCAAACAGTGACCTTCGTGGATACCTTAATGCTCTATCCATTTTGCAGGATTGCTACCCTGAAAGATTGGGGAAGATGGTTATTGTACATGCACCTTATATGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGATAATACCAAGAAAAAGATAGTATTCGTGGAGAACAAAAAGCTGAAATCAACATTGCTAGAAGAGATAGAGGAGAGTCAACTCCCAGATATATACGGAGGCCAAATGCCATTAGTTCCTATCCAGAATAGCTGA 798 0.416 MEGVSPEPLRSELDSKSKQDTAKEEDDNTFKESTDAEVTKIRLMRAFVESRDPSSKEVDDLMIRRFLRARSLDVEKASAMFLKYLKWKRSFVPNGYISPSEIAEDIAQDKVFTQGLDKKGRPIVVAFAAKHFQSKNGADGFKRYVVFVLEKLCSRMPPGQEKFLAIADIKGWAYANSDLRGYLNALSILQDCYPERLGKMVIVHAPYMFMKIWKMIYPFIDDNTKKKIVFVENKKLKSTLLEEIEESQLPDIYGGQMPLVPIQNS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1384 265 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 99 261 IPR001251 -
Gso6g1384 265 SUPERFAMILY CRAL/TRIO domain 101 258 IPR036865 -
Gso6g1384 265 Gene3D - 4 263 IPR036865 -
Gso6g1384 265 CDD SEC14 111 256 IPR001251 -
Gso6g1384 265 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 15 265 - -
Gso6g1384 265 SUPERFAMILY CRAL/TRIO N-terminal domain 13 96 IPR036273 -
Gso6g1384 265 SMART CRAL_TRIO_N_2 59 84 IPR011074 -
Gso6g1384 265 PANTHER OS03G0850700 PROTEIN 15 265 - -
Gso6g1384 265 Pfam CRAL/TRIO domain 110 255 IPR001251 -
Gso6g1384 265 MobiDBLite consensus disorder prediction 7 34 - -
Gso6g1384 265 MobiDBLite consensus disorder prediction 1 34 - -
Gso6g1384 265 SMART sec14_4 105 258 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1384 Gso-Chr6 13571958 13574997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1384 65 250 Acyl Lipid Metabolism Gene Families AT5G47730 25.366 3.75e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1384 - - gmx:100797666 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1384 6 13571958 13574997 Gso6g1384 6 13571958 13574997 ECH
Gso4g1707 4 47094603 47097463 Gso6g1384 6 13571958 13574997 GST
Gso5g1702 5 40271882 40280986 Gso6g1384 6 13571958 13574997 PCT
Gso8g0061 8 563227 568515 Gso6g1384 6 13571958 13574997 PCT
Gso6g1384 6 13571958 13574997 Gso5g1702 5 40271882 40280986 PCT
Gso6g1384 6 13571958 13574997 Gso8g0061 8 563227 568515 PCT