Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1707 ATGGAGGGTGTGAGCCCCGAGCCCCTGAGATCAGAATTGGATTCCAAATCCAAACATGACACAGCAAAAGAAGATGATGACGCTTTGAAAGACAGCACTGAAGCCGAAGTCACCAAAATTCGTCTCATGAGAGCCTTTGTTGAAAGCCGAGATCCCTCTTCCAAGGAAGAAAATGATTTGATGATGAGAAGATTCTTGCGGGCTCGTAGTTTGGATGTGGAGAAGGCTTCGGCAATGTTCCTTAAGTACTTGAAATGGAAGCGTTCATTTGTTCCAAATGGTTGCATATCACCGTCAGAGATTGCCGAAGATATTGCACAGGACAAGGTGTTTACGCAAGGACTCGACAAGAAGGGTCGACCTATAGTTGTTACCTTTGCTGCAAAACATTTTCAAAGCAAAAATGGTGCCGATGGTTTCAAACGGTATGTGGTGTTTGTTCTTGAGAAGCTTTGTTCAAGGATGCCACCGGGGCAAGAAAAGTTTCTTGCCATTGCAGACATTAAAGGATGGGCATACGTAAACAGTGACCTTCGTGGATACCTTAATTCTCTATCCATTTTGCAGGATTGCTACCCTGAAAGATTGGGGAAGATGCTTATTGTACACGCACCTTATATGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGAAAATACCAAGAAAAAGATCGTATTCGTGGAGAACAAAAAGCTGAAATCAACATTGCTAGAAGAGATAGAGGAGAGTCAAATCCCGGATATATACGGAGGCCAAATGCCATTAGTTCCTATCCAGAATAGCTGA 795 0.4226 MEGVSPEPLRSELDSKSKHDTAKEDDDALKDSTEAEVTKIRLMRAFVESRDPSSKEENDLMMRRFLRARSLDVEKASAMFLKYLKWKRSFVPNGCISPSEIAEDIAQDKVFTQGLDKKGRPIVVTFAAKHFQSKNGADGFKRYVVFVLEKLCSRMPPGQEKFLAIADIKGWAYVNSDLRGYLNSLSILQDCYPERLGKMLIVHAPYMFMKIWKMIYPFIDENTKKKIVFVENKKLKSTLLEEIEESQIPDIYGGQMPLVPIQNS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1707 264 PANTHER OS03G0850700 PROTEIN 11 264 - -
Gso4g1707 264 SUPERFAMILY CRAL/TRIO N-terminal domain 28 94 IPR036273 -
Gso4g1707 264 Pfam CRAL/TRIO domain 109 254 IPR001251 -
Gso4g1707 264 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 11 264 - -
Gso4g1707 264 Gene3D - 6 262 IPR036865 -
Gso4g1707 264 SMART sec14_4 104 257 IPR001251 -
Gso4g1707 264 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 98 260 IPR001251 -
Gso4g1707 264 SUPERFAMILY CRAL/TRIO domain 100 257 IPR036865 -
Gso4g1707 264 MobiDBLite consensus disorder prediction 7 34 - -
Gso4g1707 264 CDD SEC14 110 255 IPR001251 -
Gso4g1707 264 MobiDBLite consensus disorder prediction 1 34 - -
Gso4g1707 264 SMART CRAL_TRIO_N_2 58 83 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1707 Gso-Chr4 47094603 47097463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1707 62 227 Acyl Lipid Metabolism Gene Families AT5G47730 26.923 9.45e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1707 - - gmx:100799549 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1707 4 47094603 47097463 Gso6g1384 6 13571958 13574997 GST
Gso5g1702 5 40271882 40280986 Gso4g1707 4 47094603 47097463 PCT
Gso8g0061 8 563227 568515 Gso4g1707 4 47094603 47097463 PCT
Gso4g1707 4 47094603 47097463 Gso5g1702 5 40271882 40280986 PCT
Gso4g1707 4 47094603 47097463 Gso8g0061 8 563227 568515 PCT