Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0042 ATGAATTCTCCAATTCATGCCCCTTCACCACCTTCTTCCTCTTCTTCTTGCTCTTATAACCGTCCTCCTCCATGCATCGCTCATACTTCTCGTAATTTCAAGTTTCCTCTGCTGTTGCCACAGGCAATCCATACCTCTCAAAAGATGTATCGCTGCTCTGGAGGCCATGTGGAGTCTTCTACTAACATTAATCCCTTGAAAAATTGTGTAGTGGGAAGAAGTACTTTAGGATGGTTTGAAACTCAACCCTTGGTTTCTGAGCAATTACTCAACAGGCGCTTGTTGTCAGTGGAAGCTTTAGTCACTCCCACAGTTCAAGATTTTTCTGATACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCAGATATTATACGACTGCCAAGGTTATTTAGCTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTTTAAGAGCACCTAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGATCTCCTCTTAGACGTATAACTGATGCACAGGCTGAAGAATTGAGGAAATCTCTTTGGTCAAAGAATGTCCCAGCCAAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAACAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGTGGTTCAAGTCTTCGTCTCTTGGAGAGTATATTCAGAGATGATGAGTACCTAGTCAACATGCAGCACACAGTAATTCCTTCATGGTACCAGCGTGAAGGATACATTAAGGCCATGACAAATTTAATTGAAAAGGAGCTAAAAGGTTTTGACTGCCCTGAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTTGATTTGATCATGGAAGAGCTTGAAAAGAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGATGAGACAATAATTGAACTTGGGAAAAAGGGAGTAAAAAGCCTGCTGGCTGTACCAATTAGCTTTGTCAGCGAGCATATTGAAACTCTCGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTAAACTCTGGTATAGAAAAATGGGGTCGTGTTCCTGCGCTAGGAACTGAAACCACTTTCATTTCAGATTTGGCAGATGCTGTAATTGAGAGTCTCCCTTATGTTGGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCACTGGGCAGCGTAGAAGAGTTATTGACAGCATATGACTCGCAACGTAGGGAGTTGCCACCACCAGTAATTGTGTGGGAATGGGGATGGACCAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGGTTTCTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA 1596 0.4254 MNSPIHAPSPPSSSSSCSYNRPPPCIAHTSRNFKFPLLLPQAIHTSQKMYRCSGGHVESSTNINPLKNCVVGRSTLGWFETQPLVSEQLLNRRLLSVEALVTPTVQDFSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWSKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFRDDEYLVNMQHTVIPSWYQREGYIKAMTNLIEKELKGFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALNSGIEKWGRVPALGTETTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLTAYDSQRRELPPPVIVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFR* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0042 531 SUPERFAMILY Chlorophyll a-b binding protein 486 526 - -
Gso8g0042 531 MobiDBLite consensus disorder prediction 1 20 - -
Gso8g0042 531 ProSitePatterns Ferrochelatase signature. 308 329 IPR019772 GO:0004325|GO:0006783
Gso8g0042 531 Gene3D - 118 441 - -
Gso8g0042 531 TIGRFAM hemH: ferrochelatase 117 442 IPR001015 GO:0004325|GO:0006783
Gso8g0042 531 Pfam Ferrochelatase 118 441 IPR001015 GO:0004325|GO:0006783
Gso8g0042 531 CDD Ferrochelatase_C 287 425 IPR033644 -
Gso8g0042 531 CDD Ferrochelatase_N 119 281 IPR033659 -
Gso8g0042 531 PANTHER FERROCHELATASE 73 452 IPR001015 GO:0004325|GO:0006783
Gso8g0042 531 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 73 452 - -
Gso8g0042 531 SUPERFAMILY Chelatase 117 448 - -
Gso8g0042 531 Gene3D - 280 423 - -
Gso8g0042 531 Hamap Coproporphyrin III ferrochelatase [cpfC]. 117 442 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0042 Gso-Chr8 394605 400610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0042 K01772 - gmx:100780533 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1680 5 40082263 40088259 Gso8g0042 8 394605 400610 GST
Gso8g0042 8 394605 400610 Gso4g1734 4 47419195 47425058 PCT
Gso8g0042 8 394605 400610 Gso6g1350 6 13271079 13276815 PCT
Gso4g1734 4 47419195 47425058 Gso8g0042 8 394605 400610 PCT
Gso6g1350 6 13271079 13276815 Gso8g0042 8 394605 400610 PCT