Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1680 ATGAATTCTCCAATTCATGCCCCTTCACCTCCTTCTTCTTCTTCTTCTTGCTCCTATAACCGTCCTCCTCCATGTCTCGCTCATGCTTCTCGTAATTTCAAGTTTCCTCTGCTGTTGCCACAGGCAATCCGTACCTCTCAAAAGATGTATCGCTGCTCTGGAGGCCATGTGGAGGGTTCTACTAACACTAATCCCTTGAAAAATTATGTAGTGGGCAGAAGTACTTCAGGATGGTTTGAAACCCAACCCTTGGTTTCTGAGCAATTACTCAACAGGCGCTTGTTGCCAGTGGAAGCTTTAGTAACTCCCACAGTTCAAGATTTTTCTGATACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTCGCTGACCCAGATATTATACGACTTCCAAGGTTATTTAGCTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTTTAAGAGCACCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGATCTCCTCTTAGACGTATAACTGATGCACAGGCTGAAGAGTTGAGGAAATCTCTTTGGTCAAAGAATGTCCCAGCCAAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAACAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTTGATTTGATCATGGAAGAACTTGAAAAGAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCTTATACAGATGAGACAATAATTGAACTTGGGGAAAAGGGAGTAAAAAGTCTGCTGGCTGTACCAATTAGCTTTGTCAGCGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTAAACTCTGGTATAGAAAAGTGGGGTCGTGTTCCTGCTCTAGGAACTGAACCCACTTTCATTTCAGATTTAGCAGATGCTGTAATTGAGAGTCTCCCTTATGTTGGTGCAATGGCGGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCACTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGACTCGCAACGTAGGGAGTTGCCGCCACCAGTAATTGTGTGGGAATGGGGATGGACCAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGGTTTCTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA 1365 0.4352 MNSPIHAPSPPSSSSSCSYNRPPPCLAHASRNFKFPLLLPQAIRTSQKMYRCSGGHVEGSTNTNPLKNYVVGRSTSGWFETQPLVSEQLLNRRLLPVEALVTPTVQDFSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWSKNVPAKVYVGMRYWHPFTEEAIEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIELGEKGVKSLLAVPISFVSEHIETLEEIDVEYKELALNSGIEKWGRVPALGTEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1680 454 CDD Ferrochelatase_N 119 229 IPR033659 -
Gso5g1680 454 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 227 375 - -
Gso5g1680 454 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 74 229 - -
Gso5g1680 454 MobiDBLite consensus disorder prediction 1 21 - -
Gso5g1680 454 SUPERFAMILY Chelatase 117 371 - -
Gso5g1680 454 ProSitePatterns Ferrochelatase signature. 231 252 IPR019772 GO:0004325|GO:0006783
Gso5g1680 454 SUPERFAMILY Chlorophyll a-b binding protein 409 449 - -
Gso5g1680 454 TIGRFAM hemH: ferrochelatase 227 365 IPR001015 GO:0004325|GO:0006783
Gso5g1680 454 CDD Ferrochelatase_C 227 348 IPR033644 -
Gso5g1680 454 Pfam Ferrochelatase 229 364 IPR001015 GO:0004325|GO:0006783
Gso5g1680 454 Gene3D - 115 231 - -
Gso5g1680 454 Gene3D - 241 366 - -
Gso5g1680 454 PANTHER FERROCHELATASE 74 229 IPR001015 GO:0004325|GO:0006783
Gso5g1680 454 PANTHER FERROCHELATASE 227 375 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1680 Gso-Chr5 40082263 40088259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1680 K01772 - tcc:18612914 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1680 5 40082263 40088259 Gso5g1680 5 40082263 40088259 ECH
Gso5g1680 5 40082263 40088259 Gso8g0042 8 394605 400610 GST
Gso5g1680 5 40082263 40088259 Gso4g1734 4 47419195 47425058 PCT
Gso5g1680 5 40082263 40088259 Gso6g1350 6 13271079 13276815 PCT
Gso4g1734 4 47419195 47425058 Gso5g1680 5 40082263 40088259 PCT
Gso6g1350 6 13271079 13276815 Gso5g1680 5 40082263 40088259 PCT