Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1350 ATGAACTCTCCAATTCATGCCCCTTCTTCATCGGCATCTTCTTCCTCCTATATGCTTCGTCCTTCACCATGCCTCACTCATGCTTCTCGTAACCTCAAGTGTCCTATGTTGTTACCACAGGCAATTTGTACCTCTCAAAAGAAGTACCATTGCTTTGGAGCTAATGTGGAGGCGTCTTTTAACACAAATCCCTTGAAAAATTACACATCAGTCAGATGTTCTCCATGGTGGTCTGAAACACAATCCTTGGTTTCTAACAAAACACTCAACAAACAGTTGTTCACAGTAGAATCTTTAGCAACTTCAACAGCTCAAGATGTTTCTGATACAACTCTTATTGGTGATGATAAGATTGGTGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCGGATATAATACGTTTGCCAAGGATATTTAGTTTTTTTCAAAAGCCATTAGCTCAATTTGTATCTGTCGCAAGAGCCCCAAAGAGCAAGGAAGGCTATGCTTCAATTGGCGGTGGCTCTCCTCTCAGACGCATGACTGATGAACAGGCCGAAGAGTTGAAAAAATCTCTTTGGGAAAAGAATGTCCCAGCTGAAGTGTATGTTGGCATGCGTTACTGGCATCCTTTCACTGAAGAAGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTATTCTTCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCAAGCCTACGTCTACTGGAGAGTATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCATGGTATCAACGTGAAGGATACATAAAGGCCATGGCAAATTTAATTGAAAAAGAGTTGAAGAGTTTTGACTGCCCTGAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTTGAAGAGGCTGGTGATCCATACAAGGCTGAGATGGAGGAATGTGTGGAGTTGATCATGGAAGAGCTTGAGACACGAAAGATAACTAATGCATGCACCCTTGCTTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAGACCCTATACAGACGAGACAATAATTGAACTTGGAAGAAAGGGAGTGAAAAGTCTGCTCGCCGTTCCAATTAGCTTCGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCAGGTATAGAAAACTGGGGCCGTGTTCCTGCTCTAGGATGCGAACCTACCTTCATTTCTGATTTGGCAGATGCCGTTATTGATAGTCTCCCATATGTTGGTGCCATGGCAGCTTCAGACCTTGAAGCTCGACAGTCCCTCGTTCCATTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGATTCGCAACGCAGGGAGTTGCCACCACCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCTATGCTGGCTGTGCTTCTTCTTTTGTTTTTTGAATTCACTGCAGACAAGGGTTTGCTGCATCAGATGGGAATATGGCCCTCGCTTAGATGA 1593 0.4288 MNSPIHAPSSSASSSSYMLRPSPCLTHASRNLKCPMLLPQAICTSQKKYHCFGANVEASFNTNPLKNYTSVRCSPWWSETQSLVSNKTLNKQLFTVESLATSTAQDVSDTTLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFFQKPLAQFVSVARAPKSKEGYASIGGGSPLRRMTDEQAEELKKSLWEKNVPAEVYVGMRYWHPFTEEAIEQIKRDGITKLVILPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVELIMEELETRKITNACTLAYQSRVGPVEWLRPYTDETIIELGRKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIENWGRVPALGCEPTFISDLADAVIDSLPYVGAMAASDLEARQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRVAMLAVLLLLFFEFTADKGLLHQMGIWPSLR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1350 530 SUPERFAMILY Chelatase 116 446 - -
Gso6g1350 530 CDD Ferrochelatase_C 286 424 IPR033644 -
Gso6g1350 530 ProSitePatterns Ferrochelatase signature. 307 328 IPR019772 GO:0004325|GO:0006783
Gso6g1350 530 Gene3D - 117 439 - -
Gso6g1350 530 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 66 451 - -
Gso6g1350 530 TIGRFAM hemH: ferrochelatase 116 441 IPR001015 GO:0004325|GO:0006783
Gso6g1350 530 CDD Ferrochelatase_N 118 280 IPR033659 -
Gso6g1350 530 Pfam Ferrochelatase 117 439 IPR001015 GO:0004325|GO:0006783
Gso6g1350 530 Gene3D - 279 422 - -
Gso6g1350 530 PANTHER FERROCHELATASE 66 451 IPR001015 GO:0004325|GO:0006783
Gso6g1350 530 SUPERFAMILY Chlorophyll a-b binding protein 485 526 - -
Gso6g1350 530 Hamap Coproporphyrin III ferrochelatase [cpfC]. 116 441 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1350 Gso-Chr6 13271079 13276815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1350 K01772 - gmx:100785669 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1734 4 47419195 47425058 Gso6g1350 6 13271079 13276815 GST
Gso5g1680 5 40082263 40088259 Gso6g1350 6 13271079 13276815 PCT
Gso8g0042 8 394605 400610 Gso6g1350 6 13271079 13276815 PCT
Gso6g1350 6 13271079 13276815 Gso5g1680 5 40082263 40088259 PCT
Gso6g1350 6 13271079 13276815 Gso8g0042 8 394605 400610 PCT