Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1734 ATGAACACTCCAATTCATGCCCCTTCATCATCACCATCTTCTTCTTCTTCCTCCTACATGCTTCGTCCTCCTTCATGCCTCTCTCATCCTTCTCGTAACATCAAGTGTCCTATGTTGTTACCACAGGCAATTTGTACCTCTCAAAAGAAGTACTGGTGCTTCAGAGCTCATGTGGAGGCTTCTTTTAACACTAATCCCTTGAAAAATTACACATCAGTCAGTTGCTCTACATGGTGGTCTGAAGCACAATCCTTAGTTTCTTACAAAACACACAACAAACAGTTGTTCACTGTAGGATCTTTAGCAACTTCAACAGCTCAAGATGTTTCTGATACAACTCTTATTGGTGGTGATAAGATTGGCGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCCGACCCGGATATAATACGTTTGCCAAGGATATTTAGTTTTCTTCAAAAGCCATTGGCTCAATTTGTATCTGTCGCAAGAGCCCCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGCTCTCCTCTCAGACGCATGACTGATGAACAGGCCGAGGAGTTGAAAAAATCTCTTTGGGAAAAGAATGTCCCTGCTAAAGTGTATGTTGGCATGCGTTACTGGCATCCTTTCACTGAAGAAGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTATTCTTCCACTCTATCCACAATTTTCAATATCAACGAGTGGCTCAAGCCTACGTCTACTGGAGAGTATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTAATACCCTCATGGTATAAACGTGAAGGATACATAAAGGCCATGGCAAATTTAATTGAAAAAGAGCTGAAGAGTTTTGACTGCCCCGAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGCTGAGATGGAAGAATGTGTGGATTTGATCATGGAAGAACTTGAGACACGAAAGATAACTAATGCTTGCACCCTTGCTTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAGACCCTATACAGACGAGACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTCGCTGTTCCAATTAGCTTCGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCTGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGCGAACCTACCTTCATTTCTGATTTGGCAGATGCCGTTATTGAGAGTCTCCCATATGTTGGTGCCATGACAGCTTCAGACCTTGAAGCTCAACAATCCCTCGTTCCACTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGATTCACAACGCAGGGAGTTGCCACCACCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCTATGCTTGCTGTGCTTCTTCTTTTGTCTTTTGAATTCACTGCAGACAAGGGTTTGCTGCACCAGATGGGAATATGGCCCTTGCTTAGATGA 1599 0.4303 MNTPIHAPSSSPSSSSSSYMLRPPSCLSHPSRNIKCPMLLPQAICTSQKKYWCFRAHVEASFNTNPLKNYTSVSCSTWWSEAQSLVSYKTHNKQLFTVGSLATSTAQDVSDTTLIGGDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVARAPKSKEGYASIGGGSPLRRMTDEQAEELKKSLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVILPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYKREGYIKAMANLIEKELKSFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNACTLAYQSRVGPVEWLRPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMTASDLEAQQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRVAMLAVLLLLSFEFTADKGLLHQMGIWPLLR* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1734 532 CDD Ferrochelatase_C 288 426 IPR033644 -
Gso4g1734 532 Hamap Coproporphyrin III ferrochelatase [cpfC]. 118 443 IPR001015 GO:0004325|GO:0006783
Gso4g1734 532 MobiDBLite consensus disorder prediction 1 20 - -
Gso4g1734 532 Gene3D - 281 424 - -
Gso4g1734 532 Gene3D - 119 442 - -
Gso4g1734 532 PANTHER FERROCHELATASE 69 456 IPR001015 GO:0004325|GO:0006783
Gso4g1734 532 CDD Ferrochelatase_N 120 282 IPR033659 -
Gso4g1734 532 ProSitePatterns Ferrochelatase signature. 309 330 IPR019772 GO:0004325|GO:0006783
Gso4g1734 532 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 69 456 - -
Gso4g1734 532 SUPERFAMILY Chelatase 118 448 - -
Gso4g1734 532 Pfam Ferrochelatase 119 442 IPR001015 GO:0004325|GO:0006783
Gso4g1734 532 SUPERFAMILY Chlorophyll a-b binding protein 487 527 - -
Gso4g1734 532 TIGRFAM hemH: ferrochelatase 118 443 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1734 Gso-Chr4 47419195 47425058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1734 K01772 - gmx:100809157 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1734 4 47419195 47425058 Gso6g1350 6 13271079 13276815 GST
Gso5g1680 5 40082263 40088259 Gso4g1734 4 47419195 47425058 PCT
Gso8g0042 8 394605 400610 Gso4g1734 4 47419195 47425058 PCT
Gso4g1734 4 47419195 47425058 Gso5g1680 5 40082263 40088259 PCT
Gso4g1734 4 47419195 47425058 Gso8g0042 8 394605 400610 PCT