Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1251 ATGGCCCTCAACACCTCTTGCTCCATGGCCATTGTTGACATGCTAGGAACTCATGTTCCTAAATGTGCTATTCATGTTTCTAACACACCCAAATTTTCCTTGTCCCAGCTGAATGACAAAAAGGGCTGCAACTTGGGGTTCCCCAAACTTGTTCAAAACAACAAGGGCCTTTTCCCACTTCATGCTGTGCCATCCAAAACAATGGTGGACTTGGACAATTTGGTGCTTCAATCTCAAGAACAACCAATGGAATCAAAGACAATAAATGTCAAATTTCAGTTACAACGCAATTGTAATTTTGGGGAAGAATTTCTAGTAGTTGGTAATGATCCTATGTTTGGTTCATGGAACCCTGAAAATGCCATACCAATGACATGGTCAGAAGGGCATGTGTGGACTGCAGAGATGGGTGTACCTGTTGGAAAATTCCAATTCAAAATCATTCTGAAAACAAGAGAAGGTGAGATTGTTTGGCAGCCAGGGCCAGATAGAAATCTCCACACATGGGAAGCAATGAACAGAATCACTGTTTGTGAGGATTGGGACAATGCTGAGCAACAGAAAGTAACAGAAGATGATGGAGTTCCAAACATTAAGGAGGAAGATCAACTTGCTAACACAAACAAGGAATTCCAGATGGAGTCAGAAATGCCAAATTTTGCCGAGAATTTGGGTAATTCTAAGGAGAAGCTGAAATCAATTCTGATAAAGTGCTAA 717 0.4114 MALNTSCSMAIVDMLGTHVPKCAIHVSNTPKFSLSQLNDKKGCNLGFPKLVQNNKGLFPLHAVPSKTMVDLDNLVLQSQEQPMESKTINVKFQLQRNCNFGEEFLVVGNDPMFGSWNPENAIPMTWSEGHVWTAEMGVPVGKFQFKIILKTREGEIVWQPGPDRNLHTWEAMNRITVCEDWDNAEQQKVTEDDGVPNIKEEDQLANTNKEFQMESEMPNFAENLGNSKEKLKSILIKC* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1251 238 Gene3D Immunoglobulins 83 182 IPR013783 -
Gso7g1251 238 PANTHER BLR6771 PROTEIN 1 238 - -
Gso7g1251 238 CDD CBM20 90 181 - -
Gso7g1251 238 Pfam Starch binding domain 88 173 IPR002044 GO:2001070
Gso7g1251 238 SUPERFAMILY Starch-binding domain-like 85 179 IPR013784 GO:0030246
Gso7g1251 238 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 82 183 IPR002044 GO:2001070
Gso7g1251 238 SMART CBM_20_2 87 178 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1251 Gso-Chr7 17823179 17824473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1251 - - gmx:100814042 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1601 18 47502089 47503371 Gso7g1251 7 17823179 17824473 GST
Gso7g1251 7 17823179 17824473 Gso1g0971 1 39709947 39714363 PCT
Gso7g1251 7 17823179 17824473 Gso3g0516 3 10334940 10339631 PCT
Gso1g0971 1 39709947 39714363 Gso7g1251 7 17823179 17824473 PCT
Gso3g0516 3 10334940 10339631 Gso7g1251 7 17823179 17824473 PCT