Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1601 ATGGCCCTCAACACCTCTTGCTCCAAGGCCATTGTTGACATGCTAGGAACTCATGTTCCTAAATGTGCTATTGATGTTTCCAACACACCCAGATTTTCCTTGCCCCAGAATGACAAAAAGGGCTGCAACTTGGGATTCCCCAAACTTGTTCAAAACAAGGGCCTTTTCCCACTTCATGCTGTGCCATCCAAAACAATGGTGGACTTGGACAATTTGGTGCTTCAATCTCAAGAAAAACCAAAGGAATCAAAGACAATAAATGTCAAATTTCAGTTACAATGCAATTGTAATTATGGGGAACAATTTCTAGTAGTTGGTAATGATCCTATGTTTGGTTCATGGAACCCTGAAAAGGCCATACCAATGACATGGTCAGAAGGGCATGTGTGGACTGCAGAGATGGGTGTACCTGTTGGAAAATACCAATTCAAAATCATCCTGAAAACAGCAGAAGGTGAGATTGTTTGGCAGCCAGGGCCAGATAGAAATCTCCACACATGGGAAGCAATGAACAGAATCACTGTTTGTGAGTATTGGGACAATGCTGAGCAACAGAAAGTAACAGAAGATGATGAAGTTCCCAACACAATGGAGGAAGATCAACTTGCTCGCACAAACAAGGAATTACAGATGGAGTCAGAAATGCCAAATTTTGCTGAGAATTTGGGTAATCCTAAAGAGAAGCTGAAATCAAGGCTGCCAAAGTGCTAG 711 0.4219 MALNTSCSKAIVDMLGTHVPKCAIDVSNTPRFSLPQNDKKGCNLGFPKLVQNKGLFPLHAVPSKTMVDLDNLVLQSQEKPKESKTINVKFQLQCNCNYGEQFLVVGNDPMFGSWNPEKAIPMTWSEGHVWTAEMGVPVGKYQFKIILKTAEGEIVWQPGPDRNLHTWEAMNRITVCEYWDNAEQQKVTEDDEVPNTMEEDQLARTNKELQMESEMPNFAENLGNPKEKLKSRLPKC* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1601 236 CDD CBM20 88 179 - -
Gso18g1601 236 SMART CBM_20_2 85 176 IPR002044 GO:2001070
Gso18g1601 236 Gene3D Immunoglobulins 81 180 IPR013783 -
Gso18g1601 236 PANTHER BLR6771 PROTEIN 1 235 - -
Gso18g1601 236 MobiDBLite consensus disorder prediction 213 236 - -
Gso18g1601 236 SUPERFAMILY Starch-binding domain-like 83 176 IPR013784 GO:0030246
Gso18g1601 236 Pfam Starch binding domain 86 171 IPR002044 GO:2001070
Gso18g1601 236 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 80 181 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1601 Gso-Chr18 47502089 47503371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1601 - - gmx:102661369 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1601 18 47502089 47503371 Gso7g1251 7 17823179 17824473 GST
Gso18g1601 18 47502089 47503371 Gso1g0971 1 39709947 39714363 PCT
Gso18g1601 18 47502089 47503371 Gso3g0516 3 10334940 10339631 PCT
Gso1g0971 1 39709947 39714363 Gso18g1601 18 47502089 47503371 PCT
Gso3g0516 3 10334940 10339631 Gso18g1601 18 47502089 47503371 PCT