Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1233 ATGGTTGAGAGTTGGACAAAGCATGAACAGAAAGAAGATTGTGACAGAATTTCTCGGGGACCAAGAAGGAGGAGGGAAAAGAACAATAAAGGGTTTTGGTCAAAAGACAAAGTGGTGGTGGAGCAGTGGAGACTTGAGAGGGAGACAAAGGGTGAAACAGTTATATATGTCTCAGGGTACAAAAACCGGTTTCAGAACTTTATTAGATGCCTTCGTGAAATAGGAGATGAGGTGATGGTTGTGACAACACATGAAGGAGTGCCACAGGAATTTTATGGAGCCAAATTAATTGGATCTTGGAGCTTTCCCTGCCCTTTGTATCAGAAGGTACCCCTCTCCTTGGCACTTAGTCCAAGAATAATTTCGGAGGTAGCTCGGTTTAAGCCTGACATAATACATGCATCGTCACCAGGCATAATGATTTTTGGAGCTCTTACCATTGCAAAACTTTTGTGTGTTCCTATTGTCATGTCCTATCATACCCATGTACCTGTGTACATTCCAAGATATACCTTTAGCTGGCTGGTGAAACCCATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTGCCATCTGCTGCCATTGCGGGGGATCTCCTAGCAGCTAGAGTCACAGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCTGAAAAATTCCATCCCAAATACCGCTCCCATGAAATGCGATTAAGACTAAGCAATGGTGAACCTGACAAACCCTTGATTGTTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTGAAAAGGCTTCCTGATGCCCGAATTGCTTTCGTTGGTGATGGACCATACAGGGAGGAGCTAGAGAAAATGTTTGAAGGTATGCCTGCAGTATTCACTGGAATGTTAGTTGGGGAAGAACTGTCCCAAGCATATGCCAGTGGAGATGTATTTGTCATGCCTTCAGAGTCAGAGACACTTGGTCTTGTAGTTTTGGAGGCCATGTCTTCAGGGATACCTGTTGTGGCGGCATGTGCTGGAGGTATTCCTGATATAATCCCTGTGGATCAAGATGGTAAAACTAGCTATCTGTACAATCCAGGAGATTTTGAAGACTGCTTGAGCAAACTAAGGCCCCTTTTGCTCAACAAAGAGTTGAGAGAAACCATGGGAAAAGCTGCGCGTGAAGAGATGGAGAAGTATGATTGGAAGGAAGCCACGCGAAAGATTCGCAACGAACAATACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGAGCTCAACTATTGAGACCCTTCCAATGGCTGGCAAAACGTTTTTTCCCATCACCACAAGTCAACTAG 1335 0.4434 MVESWTKHEQKEDCDRISRGPRRRREKNNKGFWSKDKVVVEQWRLERETKGETVIYVSGYKNRFQNFIRCLREIGDEVMVVTTHEGVPQEFYGAKLIGSWSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMIFGALTIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPKYRSHEMRLRLSNGEPDKPLIVHVGRLGVEKSLDFLKRLPDARIAFVGDGPYREELEKMFEGMPAVFTGMLVGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVAACAGGIPDIIPVDQDGKTSYLYNPGDFEDCLSKLRPLLLNKELRETMGKAAREEMEKYDWKEATRKIRNEQYNAAIWFWRKKRAQLLRPFQWLAKRFFPSPQVN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1233 444 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 51 443 - -
Gso7g1233 444 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 408 - -
Gso7g1233 444 CDD GT4-like 57 412 - -
Gso7g1233 444 Pfam Glycosyltransferase Family 4 62 225 IPR028098 -
Gso7g1233 444 Gene3D Glycogen Phosphorylase B; 222 398 - -
Gso7g1233 444 Gene3D Glycogen Phosphorylase B; 64 402 - -
Gso7g1233 444 MobiDBLite consensus disorder prediction 1 28 - -
Gso7g1233 444 Pfam Glycosyl transferases group 1 246 393 IPR001296 GO:0016757
Gso7g1233 444 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 51 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1233 Gso-Chr7 17532116 17538877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1233 56 361 Glycosyltransferase AT5G01220 81.613 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1233 K06119 - gmx:100807850 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1588 18 47096798 47101856 Gso7g1233 7 17532116 17538877 GST
Gso7g1233 7 17532116 17538877 Gso1g0950 1 38535551 38540998 PCT
Gso7g1233 7 17532116 17538877 Gso3g0688 3 21035793 21041731 PCT
Gso1g0950 1 38535551 38540998 Gso7g1233 7 17532116 17538877 PCT
Gso3g0688 3 21035793 21041731 Gso7g1233 7 17532116 17538877 PCT