Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0950 ATGAACAACTCTACGTCTCTCTCTATAAATCCCTCTCTCACTCCTCCTTTTCGTTTACCTGCCACACAAACAACAACCCTATCTTCTTCTTTTTCCACTTTCCCTCAGAACTCTCTTAGATTTAGCTGTTTCCAATCGTTTCGACCAAAACCCATTAACCCCTTTTGCAGAAAAGCAAGATTGTGCTCTCTGCAAGGGTCAACGAGTGTGAAAAGCAGAAAAAGTTTGGTGCTTTGTGCTACCAACATGACTATAGCAGAGGATAGTTTGTTGCAGGTGGTGGAGGAGGAAGAGGGTCCTCCTGATTTTGCTTTGCTTGATCCTGAGGACAATTCTAGGCCTCGTAGAATTGCTCTCTTCGTTGAGCCTTCTCCTTTTGCATATGTCTCAGGATACAAAAACCGTTTCCAGAATTTTATAAAATACCTTCGTGAAATGGGAGATGAGGTGATGGTCGTGACAACACATGAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGCTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCCAAGAATAATTTCTGCTGTTGCTGAGTTTAAGCCTGACATAATACATGCATCATCACCAGGCATAATGGTTTTTGGTGCCCTTATCATTGCAAAGCTTCTGAGTGTTCCTATTGTCATGTCCTATCACACCCACGTACCAGTATACATTCCAAGATACACCTTTAGCTGGCTGGTGCAACCCATGTGGTGGGTCATAAAATTTCTGCATAGAGCAGCTGATCTTACACTGGTGCCATCAGCTGCCATTGCAAAAGATCTTGAAGAAGCTAGAGTAACAGCAGCGAACAAGATTTGTCTTTGGAACAAGGGTGTTGATTCTGAAAGTTTCCATCCGCGATTCAAGTCCCATGAAATGCGATTAAGACTGAGCAATGGTGAACCTGAGAAGCCCTTGATAGTTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGTCTCATGGATAGGCTTCCTGAAGCACGAATTGCCTTTATCGGAGATGGACCTTACAGAGAGGAACTAGAGAAAATGTTTGAAGGCATGCCAGCAGTGTTCACAGGAATGTTAGGAGGGGAAGAACTATCTCAAGCCTATGCAAGTGGAGATGTCTTTGTGATGCCGTCAGAGTCAGAGACACTTGGCCTTGTTGTTCTGGAGGCCATGTCATCAGGAATCCCTGTGGTGGGAGCGCGTGCCGGTGGCATTCCAGACATAATTCCAGAAGACCAAGATGGCAAAATTGGTTACCTCTATACACCAGGTGATCTTGAAGATTGCCTGAGCAAACTAAAGCCGCTTTTGGATGACAAAGAGTTGAGAGAAACCATGGGAGAAGCTGCACGTTTGGAGATGGAGAAGTATGATTGGAGAGCAGCCACTCAGAAGATTCGCAATGAAAACTACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTCTTGAGACCCTTTCAATGGTTGGCTCAACGTATTTTCCATTCTCCAGATCCAGAAGCCAACACATAG 1572 0.4459 MNNSTSLSINPSLTPPFRLPATQTTTLSSSFSTFPQNSLRFSCFQSFRPKPINPFCRKARLCSLQGSTSVKSRKSLVLCATNMTIAEDSLLQVVEEEEGPPDFALLDPEDNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKICLWNKGVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAARLEMEKYDWRAATQKIRNENYNAAIWFWRKKRAQLLRPFQWLAQRIFHSPDPEANT* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0950 523 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 24 518 - -
Gso1g0950 523 Gene3D Glycogen Phosphorylase B; 294 474 - -
Gso1g0950 523 Pfam Glycosyltransferase Family 4 134 297 IPR028098 -
Gso1g0950 523 Gene3D Glycogen Phosphorylase B; 131 478 - -
Gso1g0950 523 CDD GT4-like 116 486 - -
Gso1g0950 523 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 484 - -
Gso1g0950 523 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 24 518 - -
Gso1g0950 523 Pfam Glycosyl transferases group 1 317 469 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0950 Gso-Chr1 38535551 38540998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0950 74 437 Glycosyltransferase AT5G01220 79.670 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0950 K06119 - gmx:100780899 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0950 1 38535551 38540998 Gso3g0688 3 21035793 21041731 GST
Gso18g1588 18 47096798 47101856 Gso1g0950 1 38535551 38540998 PCT
Gso7g1233 7 17532116 17538877 Gso1g0950 1 38535551 38540998 PCT
Gso1g0950 1 38535551 38540998 Gso18g1588 18 47096798 47101856 PCT
Gso1g0950 1 38535551 38540998 Gso7g1233 7 17532116 17538877 PCT