Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0688 ATGAACAACTCTACGTCTCTCTCTCCTCCTTTTTGTTCACCTGCCACATTTACAACAACCCCCTCTTCTTCTTTATCAACTTTTCCTCAGAACTCTCTTAGATTTAGCTGCTCCCAATCGTTTGGACCAAAAGCCATTAACCCCTTTTGCAGAAAAGCACGATTTTGCTCTCTACAAGGGTCAACGAGTGTGAAAAGCAGAAAAAGCTTGGTGCTTTGTGCCATCAACATGACTATAGCAACGGATAGTTTGTTGCAGGTGGTGGAGGAGGAAGAGGGTCCTCCTGATTTTGCTTTGCTTGATCCCGAGGACAATTCTAGGCCTCGTAGAATTGCTCTCTTCGTTGAGCCTTCTCCTTTTGCATACGTCTCAGGATACAAAAATCGTTTTCAGAACTTTATAAAATACCTTCGTGAAATGGGAGATGAGGTAATGGTTGTCACCACACATGAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGCTTCCCTTGTCCCTGGTATCAAAAGGTGCCTCTCTCTTTGGCACTTAGTCCAAGAATAATTTCTGCGGTTGCTGAGTTTAAGCCTGACATAATACATGCATCATCACCAGGCATAATGGTTTTTGGTGCCCTTATCATTGCAAAGCTTCTGAGTGTTCCTATTGTCATGTCCTATCACACCCACGTACCAGTATACATTCCAAGATACACCTTTAGCTGGCTGGTGCAACCCATGTGGTGGGTCATAAAATTTCTGCATAGAGCAGCTGATCTTACATTGGTGCCATCAGCTGCCATTGCAAAAGATCTTGAAGAAGCTCGAGTAACAGCAGCGAACAAGATTTGTCTTTGGAACAAGGGTGTCGATTCTGAAAGTTTCCATCCACGATTCAAGTCCCATGAAATGCGATTAAGGCTGAGCAATGGTGAACCTGAGAAGCCCTTGATAGTTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGTCTCATGGATAGGCTTCCTGAAGCACGAATTGCCTTTATCGGAGATGGACCCTACAGAGAGGAACTAGAGAAAATGTTTGAAGGCATGCCAGCAGTGTTCACAGGAATGTTAGGAGGGGAAGAACTATCTGAAGCATATGCAAGTGGAGATGTCTTTGTGATGCCTTCAGAGTCAGAGACACTTGGCCTTGTTGTTTTGGAGGCCATGTCATCAGGGATTCCTGTGGTAGGAGCACGTGCTGGTGGCGTTCCAGACATAATTCCAGAAGACCAAGATGGCAAAATTGGCTACCTCTATACACCAGGTGATCTTGAAGACTGCTTGAGCAAACTAAAGCCTCTTTTGGATGACAAAGAGTTGAGAGAAACCATGGGAGAAGCTGCACGTTTGGAGATGGAGAAGTATGATTGGAGAGCAGCCACTCGAAAGATTCGCAATGAAAACTACAAAGCTGCCATTTGGTTCTGGCGCAAGAAGAGGGCTCAACTGTTGAGACCCTTTCAATGGTTGGCTCAACCTATTTTCCCATCTCCAGATCCAGAAGCCAACTCATAA 1554 0.4466 MNNSTSLSPPFCSPATFTTTPSSSLSTFPQNSLRFSCSQSFGPKAINPFCRKARFCSLQGSTSVKSRKSLVLCAINMTIATDSLLQVVEEEEGPPDFALLDPEDNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKICLWNKGVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSEAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAARLEMEKYDWRAATRKIRNENYKAAIWFWRKKRAQLLRPFQWLAQPIFPSPDPEANS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0688 517 Pfam Glycosyl transferases group 1 311 463 IPR001296 GO:0016757
Gso3g0688 517 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 20 512 - -
Gso3g0688 517 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 20 512 - -
Gso3g0688 517 Pfam Glycosyltransferase Family 4 128 291 IPR028098 -
Gso3g0688 517 Gene3D Glycogen Phosphorylase B; 288 468 - -
Gso3g0688 517 Gene3D Glycogen Phosphorylase B; 125 472 - -
Gso3g0688 517 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 111 478 - -
Gso3g0688 517 CDD GT4-like 110 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0688 Gso-Chr3 21035793 21041731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0688 40 431 Glycosyltransferase AT5G01220 74.873 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0688 K06119 - gmx:100803792 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0688 3 21035793 21041731 Gso3g0688 3 21035793 21041731 ECH
Gso1g0950 1 38535551 38540998 Gso3g0688 3 21035793 21041731 GST
Gso18g1588 18 47096798 47101856 Gso3g0688 3 21035793 21041731 PCT
Gso7g1233 7 17532116 17538877 Gso3g0688 3 21035793 21041731 PCT
Gso3g0688 3 21035793 21041731 Gso18g1588 18 47096798 47101856 PCT
Gso3g0688 3 21035793 21041731 Gso7g1233 7 17532116 17538877 PCT