Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1588 ATGAAAACCACTGCAATCACTATAAATCCCTCACTCTCTCCACCCTTTTGTTCCAAAGCCACTACCCCTCCTTCTTGTTCTTCATCATCTTCTTCGTTCCCTCCTAGTTTCCCACGTTTTCACTTGTCGGGAGCAAAACCCATTTCTCTTTCTTGCAGAGGAACACGATTGTGCTTCTTGAAAGGGTCTAAAACTCTTTGGGGTAGAAAAAGTTTTGTGCTTGGGGCTGGAAACATGACCATGGCAGAGGTTGATTCTCATGAAGAGGGGGAGAACGAGGGTGCTTTGGTTGGCTCTGAGAATGAGAACAATTCAAGGCCTCGGAGAATTGCTCTCTTTGTCGAGCCTTCTCCCTTTGCATATGTCTCAGGCTACAAAAACCGGTTTCAGAACTTTATTAGATGCCTACGTGAAATGGGTGATGAGGTGATGGTCGTGACAACACATGAAGGAGTGCCACAGGAATTTTATGGAGCCAAATTAATTGGATCTTGGAGCTTTCCCTGCCCTTTGTATCAGAAGGTACCCCTCTCCTTGGCACTTAGTCCAAGAATAATTTCGGAGGTAGCCCGGTTTAAGCCTGACATAATACATGCATCATCGCCAGGCATAATGGTTTTTGGAGCTCTTATCATTGCAAAACTTTTGTGTGTTCCTATTGTCATGTCCTATCATACCCATGTACCAGTGTACATTCCAAGATATACCTTTAGCTGGCTGGTGAAACCAATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTGCCATCTGCTGCCATTGCGGGGGATCTCCTAGCAGCTAGAGTCACAGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCTGAAAAATTCCATCCCAAATACCGCTCCCATGAAATGCGATTAAGACTAAGCAATGATGAACCTGACAAACCCTTGATAATTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTGAAAAGGCTCATGGATAGGCTTCCTGATGCCCGAATTGCTTTCGTTGGTGATGGACCATACAGGGAAGAACTAGAGAAAATGTTTGAAGGTATGCCAGCAGTATTCACTGGAATGTTAGGAGGAGAAGAACTGTCCCAAGCATATGCCAGTGGAGATGTATTTGTCATGCCTTCAGAGTCAGAGACGCTTGGTTTTGTAGTTTTGGAGGCGATGTCTTCAGGGATACCTGTGGTGGCGGCACGTGCTGGAGGTATTCCTGATATAATCCCTGCAGATCAAGATGGTAAAACTAGCTATCTGTATGATCCACGAGATCTTGAAGACTGCTTGAGCAAACTAAGGCCCCTTTTGCACAACAAAGAGTTGAGAGAAACCATGGGTAAAGCTGCACGTGAAGAGATGGAAAAGTATGATTGGAAGGCAGCCACGCGAAAGATTCGCAACGAACAATACAACGCTGCCATTTGGTTCTGGCGCAAGAAAAGAGCCCAACTATTGAGACCCTTCCAACGGCTGGCAAAACGTTTTTTCCCATCCCCACAAGTCAACTACAGGTGA 1548 0.4522 MKTTAITINPSLSPPFCSKATTPPSCSSSSSSFPPSFPRFHLSGAKPISLSCRGTRLCFLKGSKTLWGRKSFVLGAGNMTMAEVDSHEEGENEGALVGSENENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPQEFYGAKLIGSWSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPKYRSHEMRLRLSNDEPDKPLIIHVGRLGVEKSLDFLKRLMDRLPDARIAFVGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAMSSGIPVVAARAGGIPDIIPADQDGKTSYLYDPRDLEDCLSKLRPLLHNKELRETMGKAAREEMEKYDWKAATRKIRNEQYNAAIWFWRKKRAQLLRPFQRLAKRFFPSPQVNYR* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1588 515 Pfam Glycosyl transferases group 1 310 462 IPR001296 GO:0016757
Gso18g1588 515 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 19 514 - -
Gso18g1588 515 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 19 514 - -
Gso18g1588 515 Pfam Glycosyltransferase Family 4 127 290 IPR028098 -
Gso18g1588 515 Gene3D Glycogen Phosphorylase B; 305 467 - -
Gso18g1588 515 CDD GT4-like 109 481 - -
Gso18g1588 515 Gene3D Glycogen Phosphorylase B; 109 304 - -
Gso18g1588 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1588 Gso-Chr18 47096798 47101856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1588 3 430 Glycosyltransferase AT5G01220 70.766 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1588 K06119 - gmx:100807850 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1588 18 47096798 47101856 Gso7g1233 7 17532116 17538877 GST
Gso18g1588 18 47096798 47101856 Gso1g0950 1 38535551 38540998 PCT
Gso18g1588 18 47096798 47101856 Gso3g0688 3 21035793 21041731 PCT
Gso1g0950 1 38535551 38540998 Gso18g1588 18 47096798 47101856 PCT
Gso3g0688 3 21035793 21041731 Gso18g1588 18 47096798 47101856 PCT