Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0710 ATGGGTTTGTTTTCTGGGATTTTTATGGGGGTGTTGTTCGGCATCGCATTGATGGCTGGATGGGCGCGCATGATGAAGTACCGAAGTGCCAAACGATTTGCAAAGGCAGCTGACATTAAACTCCTTGGATCCCTTAATAGAGATGATTTGAAGAAAATTTGTGGTGATAATTTGCCTGAGTGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTAAACAAGAAACTGACCAAACTTTGGCCATTTGTAGCAGAAGCAGCAACCATGGTGATAAGAGAATCTGTTGAACCACTGCTAGAAGAGTACAGACCTCCAGGAATTACTTCATTGAAGTTCAGCAAGCTGTCACTTGGAAATGTGGCTCCGAAAATTGAAGGTATTCGTGTTCAGAGCTTAACCAAAGGTCAAATCATAATGGATATTGATTTCCGTTGGGGTGGTGATCCTAGTATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCAATCCCTATTCAGTTGAAGGATCTACAGGTTTTCACCATTGTCCGTGTGATATTCCAACTTGCTGAAGAGATCCCTTGCATTTCTGCTGTTGTTGTAGCTCTGCTTGCTGAGCCAAAGCCCAGGATTGATTATACTCTGAAAGCTGTTGGTGGAAGTTTAACGGCTATTCCTGGAATCTCAGATATGATTGATGATACTGTGAACTCAATTGTTACTGACATGCTCCAATGGCCTCATAGGATTGTGGTTCCACTTGGTGGCATTCCTGTTGATACCAGTGAACTGGAGCTTAAACCCCAGGGAAAACTTGCACTGACTGTAGTGAAAGCGACTGCTTTAAAGAATATGGAAATGATTGGAAAGTCAGATCCTTATGTAGTTGTGCATATTCGACCATTATTTAAGTATAAAACCAAGGTTATTGATAACAACTTGAATCCTACCTGGAATGAGAAATTTGAGTTGATTGCAGAAGACAAGGAGACCCAATCACTAATTCTTGAGGTTCTTGATAAAGACATTGGACAAGATAAGCGATTGGGAATAGCACAGTTACCCCTTATTGATCTAGAAATACAAACTGAAAAGGAGATTGAATTGAGGCTGCTGCCCTCACTTGATACACTGAAGGTGAAAGATAAGAAGGATCGAGGAACCTTAACAGTAAAGGTCATGTATTATCAGTTTAACAAGGAAGAGCAGCTGGTTGCACTAGAGGCAGAAAAGAAGATACTAGAAGAAAGGAAGAAACTGAAAGAAGCTGGAATGATAGGAAGCACGATGGATGCACTAGATGGAGCAGTATCAGTGGTAGGCTCTGGTGTTGGACTGGTTGGTACTGGTGTTGTTGCTGGTGCCGGTCTTGTGGGAAGTGGTATTGGTGCTGGAGCCGGGCTTGTTGGAAGCGGCATCGGTGCTGGAGTTGGTATTGTTGGGAGTGGTCTTGGAGCCGTTGGTAGTGGACTGAGCAAGGCAGGGAAGTTCATGGGAAGGACAATCACTGGTCATAGTGGCTCCAGAAAGAGTGGTTCTTCAACGCCAGTCAACAATGCACAGGAGAATGGTGGTGGTGCAAAGCCTCTTTGA 1575 0.4337 MGLFSGIFMGVLFGIALMAGWARMMKYRSAKRFAKAADIKLLGSLNRDDLKKICGDNLPEWISFPVYEQVKWLNKKLTKLWPFVAEAATMVIRESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLTKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTIVRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTAIPGISDMIDDTVNSIVTDMLQWPHRIVVPLGGIPVDTSELELKPQGKLALTVVKATALKNMEMIGKSDPYVVVHIRPLFKYKTKVIDNNLNPTWNEKFELIAEDKETQSLILEVLDKDIGQDKRLGIAQLPLIDLEIQTEKEIELRLLPSLDTLKVKDKKDRGTLTVKVMYYQFNKEEQLVALEAEKKILEERKKLKEAGMIGSTMDALDGAVSVVGSGVGLVGTGVVAGAGLVGSGIGAGAGLVGSGIGAGVGIVGSGLGAVGSGLSKAGKFMGRTITGHSGSRKSGSSTPVNNAQENGGGAKPL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0710 524 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 519 - -
Gso7g0710 524 Gene3D C2 domain 259 418 IPR035892 -
Gso7g0710 524 PRINTS C2 domain signature 281 293 IPR000008 -
Gso7g0710 524 PRINTS C2 domain signature 306 319 IPR000008 -
Gso7g0710 524 PRINTS C2 domain signature 328 336 IPR000008 -
Gso7g0710 524 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 519 IPR045050 GO:0008289
Gso7g0710 524 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 392 IPR035892 -
Gso7g0710 524 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
Gso7g0710 524 Pfam C2 domain 264 359 IPR000008 -
Gso7g0710 524 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Gso7g0710 524 MobiDBLite consensus disorder prediction 494 524 - -
Gso7g0710 524 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Gso7g0710 524 SMART C2_3c 265 362 IPR000008 -
Gso7g0710 524 MobiDBLite consensus disorder prediction 498 516 - -
Gso7g0710 524 CDD C2 266 360 - -
Gso7g0710 524 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0710 Gso-Chr7 7705408 7716259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0710 249 350 Lipid Metabolism Gene Families AT3G61300 33.010 1.34e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0710 - - gmx:100777838 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0710 7 7705408 7716259 Gso3g0165 3 2110544 2121334 GST
Gso18g2043 18 53270783 53284419 Gso7g0710 7 7705408 7716259 PCT
Gso9g2197 9 46318150 46325193 Gso7g0710 7 7705408 7716259 PCT
Gso7g0710 7 7705408 7716259 Gso18g2043 18 53270783 53284419 PCT
Gso7g0710 7 7705408 7716259 Gso9g2197 9 46318150 46325193 PCT