Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0470 ATGTCTGGTTACAGCCCCATGTTCCTCGTAATCCTCAGTGTCGTCGTAGGTTTCACGATTCGGTGGTTCCTGTTCAAAACGGGATTGATACACACCATAAGAATACGCTTCCCAAGGGTCGTGGATTGGTTCCACGTGTACCAGTTCCTCAAAGTCCCCGAATTTAACGAAACCAATATGCAGCGGAATAACCTTCACCGCAAAGTTTCTCTCTATTTGCATTCCCTCCCTTCAATAGAAGACGCTGACTACACCAATCTCATAACCGCTAATGACCAAAGCGACATCGTTTTGCGCCTCGACCCGAACCAAACCATCGAGGACCGCTTCCTCGGGGCCAGACTCTATTGGTTCAACCAAAAAACCGAACCGAACCGGATTTCCTCCTTCGTTCTCCAAATCAGAAAAACTGATAAACGCCGCATCCTCCGCCAGTACCTCCGCCACATCGACACCATCGCCGACGAGATGAACAACCAAAGCAAGCGCCATTTACGGCTGTTCATGAACGCCGGCGCCGGCGGAGGAACACGGTGGAGATCCGTTCCGTTTAATCATCCGGCGACGTTTGAAACGATGGCGATGGAGAAGGATCTCAAGAACAAGATCAAATCAGATCTCGAATCGTTTCTCAAGGCGAAGCAGTATTACCGGAAACTCGGCCGCGCGTGGAAGAGGAGCTATCTCTTGTATGGTGCCTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCGATGGCGAACTTCCTCCGCTACGACGTGTACGACGTGGATCTCTCCAAGATTCGCGGCGATTCGGATCTGAAGTTTCTGTTGACGGAAACGACGGCGAAGTCGGTAATCCTGGTGGAGGATCTGGACCGGTTTATGGAACCAGAATCGGAGACAGCGACGGCGGTTACCGCGTCGGGAATCCAGAGCTTCATGGACGGGATCGTTAGCGCGTGTTGCGGCGAGGAGAGGGTGATGGTGTTCACGATGAACAGCAAGGAGTGCGTGGACCCGAACCTGCTGCGGCCGGGTCGGGTCGACGTGCACATCCACTTTCCGGTGTGCGATTTCTCGGCGTTCAAGACGCTGGCGAGCAGCTACCTCGGCGTGAGGGAGCACAAGCTGTTCGCGCAGGTGGAGGATATTTTCCGGCACGGTGCGACTCTCAGCCCCGCCGAGATCAGCGAGTTGATGATCGCGAACCGGAACTCGCCGAGTCGCGCCATCAAATCGGTGATCGGGGCGCTGCAATCGGACGGTGAAGGGAGAAGATCGTACGCGGATTCAATCGGACGGCGGATAGAGGGTGATGACGTGGACGAAGCGCCCTGTGGTGGGGACGGGTTCTCTACGGTTAAGGATTTAAGGAAGTTTTACGGTTTCTTCAAATTGCGGAACCCCAGAAGAACTTCTCAACAGTCCAACTCCTCGCCCCATGATAGATAA 1434 0.5446 MSGYSPMFLVILSVVVGFTIRWFLFKTGLIHTIRIRFPRVVDWFHVYQFLKVPEFNETNMQRNNLHRKVSLYLHSLPSIEDADYTNLITANDQSDIVLRLDPNQTIEDRFLGARLYWFNQKTEPNRISSFVLQIRKTDKRRILRQYLRHIDTIADEMNNQSKRHLRLFMNAGAGGGTRWRSVPFNHPATFETMAMEKDLKNKIKSDLESFLKAKQYYRKLGRAWKRSYLLYGASGTGKSSFVAAMANFLRYDVYDVDLSKIRGDSDLKFLLTETTAKSVILVEDLDRFMEPESETATAVTASGIQSFMDGIVSACCGEERVMVFTMNSKECVDPNLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVREHKLFAQVEDIFRHGATLSPAEISELMIANRNSPSRAIKSVIGALQSDGEGRRSYADSIGRRIEGDDVDEAPCGGDGFSTVKDLRKFYGFFKLRNPRRTSQQSNSSPHDR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0470 477 Pfam Domain associated at C-terminal with AAA 31 118 IPR025753 -
Gso7g0470 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 408 IPR027417 -
Gso7g0470 477 Gene3D - 180 350 IPR027417 -
Gso7g0470 477 Pfam ATPase family associated with various cellular activities (AAA) 229 349 IPR003959 GO:0005524|GO:0016887
Gso7g0470 477 PANTHER BCS1 AAA-TYPE ATPASE 7 437 - -
Gso7g0470 477 CDD AAA 225 349 - -
Gso7g0470 477 PANTHER BNAC04G00800D PROTEIN 7 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0470 Gso-Chr7 4673088 4675102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0470 183 394 Miscellaneous Gene Families AT5G53170 25.000 3.78e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0470 - K08900 gmx:100787809 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0470 7 4673088 4675102 Gso7g0470 7 4673088 4675102 ECH
Gso7g0470 7 4673088 4675102 Gso16g0176 16 2031555 2033623 GST
Gso19g2173 19 50187121 50189016 Gso7g0470 7 4673088 4675102 PCT
Gso3g2212 3 47276274 47278128 Gso7g0470 7 4673088 4675102 PCT
Gso7g0470 7 4673088 4675102 Gso19g2173 19 50187121 50189016 PCT
Gso7g0470 7 4673088 4675102 Gso3g2212 3 47276274 47278128 PCT