Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0138 ATGGAAAGCAATACACCAGTAATAGCAAAGAAAGTGTTGAGCATAATACGTGTGGCCTTCTTCATGCTGAGGAAAGGCATATCAAAGGGTAAGCTAATGATGCACCTCAACAACATGATGCTCAAACGCCCCGGCAAAGCCATCGCCAACCTCATGTTCCACCACCACCACAACCACGGTGTCTCCGGCAACAACCTCCAATTCTCCACCGCCAGGGAGTACGAGTTCAGCTGCAGCAACACACCCAACAACTTCTTCGCGGCAGCCCTTGCCAGCAACAACAAACGGCACCGCCACAACCCCTTCTTCACGTGCGCTCACGCGCCGCCAACCCTTGACGACGACACGGTGACCGTTAATGCCGTTAAGGGCGTGTTGGAGATGCTGAACAATGAGGCCTTCGAGGAGGCATCGCCGGCTGTGGCCACCGCGCTTTCCGGGTTCGGACGTAGCCCTATGGTGAGGAAGTTGATCAGGGTGACGGACTCTCCGTTCCCACTTGGTGAGTCTGAGGATGACAAGGACAACCAAGTGGACAAGGCTGCGGAAGAGTTCATAAAGAGATTCTACAAAGAGTTGAGGAAGCAGACTTGA 594 0.5387 MESNTPVIAKKVLSIIRVAFFMLRKGISKGKLMMHLNNMMLKRPGKAIANLMFHHHHNHGVSGNNLQFSTAREYEFSCSNTPNNFFAAALASNNKRHRHNPFFTCAHAPPTLDDDTVTVNAVKGVLEMLNNEAFEEASPAVATALSGFGRSPMVRKLIRVTDSPFPLGESEDDKDNQVDKAAEEFIKRFYKELRKQT* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0138 197 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 196 - -
Gso7g0138 197 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 196 - -
Gso7g0138 197 Pfam Cotton fibre expressed protein 175 196 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0138 Gso-Chr7 1329529 1330453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0138 - - gmx:100801941 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0138 7 1329529 1330453 Gso7g0138 7 1329529 1330453 ECH
Gso8g0293 8 2745697 2746804 Gso7g0138 7 1329529 1330453 ECH
Gso7g0138 7 1329529 1330453 Gso8g1676 8 16429368 16430307 GST
Gso15g0175 15 1462344 1463235 Gso7g0138 7 1329529 1330453 PCT
Gso11g3636 11 52077785 52078655 Gso7g0138 7 1329529 1330453 PCT
Gso7g0138 7 1329529 1330453 Gso15g0175 15 1462344 1463235 PCT
Gso7g0138 7 1329529 1330453 Gso11g3636 11 52077785 52078655 PCT