Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3636 ATGGAAAGTAACGCACCAGTACTAGCAGAGAAAGTGTGGAGCATGGTACGTGTGCTGTTGTTCATGCTTCGAAAAGGCATATCAAAGGGGAAGCTAATGATGGATCTCAACATGATGCTCAAACGCCGCGGCAAGCTCGCCGGCAAAGCCATTGCCAATCTAATGTCCCACAACCACAACCACCGTGGGTCCCACAAGTCGCAACTTCGGTTCTCTGCTCCAAGGGAGTACGAGTTCAGCTGCAGCAACACTCCCCACAACTTGTTGTTCCCCACAGCAGGGAAGCGCCACCGCCACTTCTTCGCCTGCGTCCACGCGCCTCCCACGCAGGACGACGACGTCGTGACGGTGAACGCAATGAAGGCAGTGTTGGAGATGCTCAACAACAACGACGTCGTTAAGGTTGAGGCGTCCCCTGCGCTGCCAGGGTTTGGACGGAGCCCTATTGTGAGGCAGCTTAGGGTTACGGACTCCCCATTCCCTCTGCGAGACTCCGACCATGACAACGACCACCAGGTCGATAAGGCGGCGGAAGAGTTCATAAAGAGGTTTTACAAGGACTTGAAGAAGCAGGATTAA 579 0.5458 MESNAPVLAEKVWSMVRVLLFMLRKGISKGKLMMDLNMMLKRRGKLAGKAIANLMSHNHNHRGSHKSQLRFSAPREYEFSCSNTPHNLLFPTAGKRHRHFFACVHAPPTQDDDVVTVNAMKAVLEMLNNNDVVKVEASPALPGFGRSPIVRQLRVTDSPFPLRDSDHDNDHQVDKAAEEFIKRFYKDLKKQD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3636 192 Pfam Cotton fibre expressed protein 171 191 IPR008480 -
Gso11g3636 192 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 191 - -
Gso11g3636 192 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3636 Gso-Chr11 52077785 52078655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3636 - - gmx:100802625 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0175 15 1462344 1463235 Gso11g3636 11 52077785 52078655 GST
Gso11g3636 11 52077785 52078655 Gso7g0138 7 1329529 1330453 PCT
Gso11g3636 11 52077785 52078655 Gso8g1676 8 16429368 16430307 PCT
Gso7g0138 7 1329529 1330453 Gso11g3636 11 52077785 52078655 PCT
Gso8g1676 8 16429368 16430307 Gso11g3636 11 52077785 52078655 PCT