Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0293 ATGGAAATTGAGGCAAGCAGGCCGGTGGTGGCAAAGAAGGTATGGAACATGGTACGCGTGTTGTTCTTCATGCTGAGAAAGGGCATAGCCAAGAGCAAAATAATGGTGGAGTTCCATCTCATGCTCAAACGTGGGAAACTTGCACTTAACAACCTCATCCTCAACCATCACTACTACAACATGCAGACCTCCTTCTTCACATGCCGATCCCACCACCACAGCACCTTCATCTCCCCAAGCGACTACGAGTTCAGCTGCAGCAACAGCCCTGCCATCCCCACCAAACGCACCAACCGCTTTTCCACCAAATCCCTCTCCTCAGTTCAGAAGGTTCTGGAGATCCTCAACAACGAAAACAATATTAATTCTCCCTTTCCTGGCTTCGGAAAGAGCCCTGCTTCTGTCAGACAGCTAAGAGTCACCGACTCACCCTTCCCTCTCAAGGACGAAGAGGATAGCCAAGTCGACGTGGCAGCCGAAGAATTCATTAAGAACTTCTATAAGGACCTCAACTTGCAAAAAAAAATGGCATATCTTGACTCCCCCTATCATATTTCCTGGAACAGATGA 570 0.4842 MEIEASRPVVAKKVWNMVRVLFFMLRKGIAKSKIMVEFHLMLKRGKLALNNLILNHHYYNMQTSFFTCRSHHHSTFISPSDYEFSCSNSPAIPTKRTNRFSTKSLSSVQKVLEILNNENNINSPFPGFGKSPASVRQLRVTDSPFPLKDEEDSQVDVAAEEFIKNFYKDLNLQKKMAYLDSPYHISWNR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0293 189 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 4 185 - -
Gso8g0293 189 Pfam Cotton fibre expressed protein 153 178 IPR008480 -
Gso8g0293 189 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0293 Gso-Chr8 2745697 2746804 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0293 - - gmx:100305871 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0293 8 2745697 2746804 Gso7g0138 7 1329529 1330453 ECH
Gso8g0293 8 2745697 2746804 Gso8g0293 8 2745697 2746804 ECH