Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2537 ATGGATTTTCGCATCTATGGCGTCACGATCCTTCTCTTCCTCTTCCCAACCCTCACATTCTCAATCTCACAGGGTCAGATAAACTCAAACTCAATCCTTGTCGCTCTGTTGGACTCCCATTACACCGAACTCGCTGAGCTTGTGGAAAAAGCCATGCTTTTGCAGACTCTGGAGAACACTGTCATGAACAACAGCAACAACATCACAATCTTCGCTCCCAGAAACGAAGCCCTCGAACGCGATCTCGACCCCGATTTCAAGCGTTTCCTCCTCGAACCCCGCAATCTCCATTCCCTCCAAACCCTCCTCTTGTCCCACATCGTCCCCAAAAGAATCACCAAACCCGAATTCAAAACCGGGTCGACCCGACACAGAACTTTAGCGTCTCACCACCACCTCACTCTCCAAGCCCTGAATTTGACTCACTGGAATGTTGAGTCTTCCCGGGTTATTAACCCGAATTCGGTAACCCGACCCGACGGAGTGATCCACGGCATCGACACTCTCCTCATCCCTCGCTCAGTCCAAGACGAATTCAACCGTCGCCGGAATCTGATCTCCATCGCCGCGGTAAAACCCGAACCATCCCCGGAGGTCGACCCGCGAACCCACCGGTTAAAGAAACCGGCGCCGGCAGCGCCGGCGGGGGCCCCGCCGGCGCTCCCGATCTACGACGCGATGGCGCCGGGGCCATCGCTTGCACCGGCGCCAGCGCCGGGTCCGGGTGGGTCCCACAAGCACTTCAATGGGGAAAAGCAAGTAAAAGATTTCATCGAGACGTTACTCCACTACGGCGGCTACAACGAGATGGCGGATATTCTGGTAAACCTAACGTCCCTGGCGATGGAGATGGGAAGGTTGGTTTCGGAGGGTTACGTTTTGACGGTGTTAGCACCTAACGACGAGGCCATGGCGAAGTTAGCGACGGAGCAATTAAGTGAACCGGGTTCGCCCGAACAGATTATGTACTATCACTTGATACCCGAGTATCAGACCGAGGAGAGCATGTACAATGCCGTCAGAAGGTTCGGGAAGGTCCGTTACGACACGTTACGGTTGCCGCACAAGGTCACGGCGCAGGAGGCTGACGGCTCCGTTAAGTTCGGCCACGGGGACACGTCTGCTTACTTGTTCGACCCCGATATTTACACGGATGGACGGATCTCCGTTCAGGGAATTGACGGCGTTCTGTTTCCGCCTCAGGAGGAAGAAGCCGCCGGGCCCGTTACCCGAGCCCAGCCCGCTAAGGTCGTCGTCAAGCAAAGAAGAGGAAAATTGTTGGAAACAGCATGTTGGATGCTTGGAAGCTTTGGACAGAACTCTAGATTCATCTCTTGTCAATGA 1344 0.5491 MDFRIYGVTILLFLFPTLTFSISQGQINSNSILVALLDSHYTELAELVEKAMLLQTLENTVMNNSNNITIFAPRNEALERDLDPDFKRFLLEPRNLHSLQTLLLSHIVPKRITKPEFKTGSTRHRTLASHHHLTLQALNLTHWNVESSRVINPNSVTRPDGVIHGIDTLLIPRSVQDEFNRRRNLISIAAVKPEPSPEVDPRTHRLKKPAPAAPAGAPPALPIYDAMAPGPSLAPAPAPGPGGSHKHFNGEKQVKDFIETLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLATEQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVTAQEADGSVKFGHGDTSAYLFDPDIYTDGRISVQGIDGVLFPPQEEEAAGPVTRAQPAKVVVKQRRGKLLETACWMLGSFGQNSRFISCQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2537 447 ProSiteProfiles FAS1/BIgH3 domain profile. 254 397 IPR000782 -
Gso6g2537 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 447 IPR044654 -
Gso6g2537 447 Pfam Fasciclin domain 40 172 IPR000782 -
Gso6g2537 447 Pfam Fasciclin domain 292 399 IPR000782 -
Gso6g2537 447 Gene3D FAS1 domain 276 400 IPR036378 -
Gso6g2537 447 SUPERFAMILY FAS1 domain 233 400 IPR036378 -
Gso6g2537 447 SUPERFAMILY FAS1 domain 31 173 IPR036378 -
Gso6g2537 447 SMART fasc_3 295 400 IPR000782 -
Gso6g2537 447 SMART fasc_3 69 173 IPR000782 -
Gso6g2537 447 Gene3D FAS1 domain 32 173 IPR036378 -
Gso6g2537 447 ProSiteProfiles FAS1/BIgH3 domain profile. 28 170 IPR000782 -
Gso6g2537 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 447 - -
Gso6g2537 447 MobiDBLite consensus disorder prediction 193 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2537 Gso-Chr6 47093505 47098070 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2537 - - gmx:100802279 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0785 12 8162326 8166774 Gso6g2537 6 47093505 47098070 GST
Gso12g1607 12 39635947 39639703 Gso6g2537 6 47093505 47098070 PCT
Gso11g3247 11 48253086 48256528 Gso6g2537 6 47093505 47098070 PCT
Gso6g2537 6 47093505 47098070 Gso12g1607 12 39635947 39639703 PCT
Gso6g2537 6 47093505 47098070 Gso11g3247 11 48253086 48256528 PCT