Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2485 ATGCAGCTTTTTCACAAACCCAGCAAGGGTCAGTCTCTGATTAATTCCATATTGGTCTCTTCATCGTTCTGTGCCCTTTATCTCATTGTGTCAGTGCTTCTTTTGGGGCCTTCAAAGCTAGTTCATGTGAATAGGTCATCATCACAAGATGTGTCCACAACACCAACCACCCTTGATCACCTTGTGTTTGGAATTGCTTCAAGCAAGATTTCTTGGTTCAAGAGGAAGGACTACGTGAAGCTGTGGTGGAACAACAACAACAACAACAACAACAACAAAACAATGAAAGGGTGTGTGTTTTTGGATAGTCTCTCGGATGAAGACAATGGTAGGAATGAGAATGACACTTCTCTTCCTCCTCTCTGTGTCTCTCAGGACACTTCAAGGTTTCGTTTCACTCACAAGGGTGGTCTGCGATCGGCGATTCGCGTGGCGCGTGTTGTTGGGGAGACAGTGGCAATGTACAATGATTCGGAGGTGAGGTGGTATGTTTTTGGAGATGATGACACGGTTTTCTTCCCGGAGAATGTGGTGAAGATGCTTTCCAAGTATGATCATGAGCTTTGGTACTACATTGGTGCACACTCTGAGGTTTATGAGCAGAATAGGGTGTTTGGTTTTGGAATGGCTTTTGGAGGTGCAGGTTTTGCTATCAGCTCCTCTCTGGCTAAGGTCTTGGCCAAGGTTTTTGATTCTTGTATTGAAAGGTACCCTCATCTCTATGGAAGTGATGGCAGGGTGTACTCTTGCTTGGCAGAACTTGGGGTAGGATTAACACATGAACCCGGTTTTCACCAGGTAGATTTAAAGGGAAACACCTTTGGCATATTGGCGGCACATCCTTTAACTCCTCTGTTGTCCCTGCATCATCCTGATTACACTGATCCAATCTTTCCAAACATGACAACTAAACAAGCTCTGAAGCATTTGTTTGAAGCTGCAAATGTGGATTCCCAGAGGATGCTGCAACAAGCAATATGCTATGACAGATGGTTTTCATGGACAGTTTCAGTGTCATGGGGCTATGCTGTTCAGGTTTTCCCAAACCATATGCTTTTGCCGGATGTTCTGAAGGTGCAAGAGACATTCAAGCAGTGGAGGAAGGGAAACATGTTGGCAAAATCATACACTTTCAACACAAGAGAACTTCACCCTGACCCTTGTAAAAGATCCACTGTTTTCTTTCTAGACAATGTGTCTTCTGGCAAGGATGGCATCATAAGCAGTTACAAGAAATCCTTTCAGAATTGCTCGATCGATGATGACGTATCGCCGAAGAAACTGGAAGTGATCAAAGTGGTCACAAATAAGCTAGACCTTGACATCAAACAGTTGCGTGCTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTACTGCACGGGACCAAATGGAAATTGCAATCAGAGAATGCAAAGATGAAGAATTGGTTTACATGCACTGA 1443 0.4428 MQLFHKPSKGQSLINSILVSSSFCALYLIVSVLLLGPSKLVHVNRSSSQDVSTTPTTLDHLVFGIASSKISWFKRKDYVKLWWNNNNNNNNNKTMKGCVFLDSLSDEDNGRNENDTSLPPLCVSQDTSRFRFTHKGGLRSAIRVARVVGETVAMYNDSEVRWYVFGDDDTVFFPENVVKMLSKYDHELWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNTFGILAAHPLTPLLSLHHPDYTDPIFPNMTTKQALKHLFEAANVDSQRMLQQAICYDRWFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFKQWRKGNMLAKSYTFNTRELHPDPCKRSTVFFLDNVSSGKDGIISSYKKSFQNCSIDDDVSPKKLEVIKVVTNKLDLDIKQLRAPRRHCCDVLPSTARDQMEIAIRECKDEELVYMH* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2485 480 Pfam Protein of unknown function, DUF604 201 453 IPR006740 -
Gso6g2485 480 Gene3D - 48 309 - -
Gso6g2485 480 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 478 - -
Gso6g2485 480 PANTHER FRINGE-RELATED 9 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2485 Gso-Chr6 46615412 46618067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2485 13 445 Glycosyltransferase AT1G05280 54.214 9.44e-171 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2485 - - gmx:100784602 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0835 12 9011452 9013798 Gso6g2485 6 46615412 46618067 GST
Gso11g3208 11 47861935 47864280 Gso6g2485 6 46615412 46618067 PCT
Gso6g2485 6 46615412 46618067 Gso11g3207 11 47855883 47858252 PCT