Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3207 ATGCAGTCACTTCACAAAATCGCCACAACCCAAACTCTGATAAACTTGGTTTTAGTCTCGTCTTCATTTTGTGCCATTTATATCCTCGTATCAGTGGTACTATTAGGAACACCATCAAAGCTAGAAAACTTGCATTCTTCATCACATAATGTGTATGAATCTAAAACCACCACAACCCTTGACCATCTTGTGTTTGGAATTGCTTCAAGTCGGTCTTCATGGCCTAAGAGGAAGGAATACGTGAAGCTCTGGTGGAACACCATACGCAACACAACAATGAGAGGATGCGTATTCGTGGATACACTTCCACAAGACAAAGATAACAACAACAATGCCAGTACCCTTCCTCCTCTCTGTGTCTCCCAAGACACTTCACGGTTTCGCTACACTTACAGTGGTTGGGGAGGGGGAATGAGATCAGCAATTCGTGTGGCGCGTGTGGTGAAGGAGACAGTGGCACGGATGAACCATTCTCATATTAGGTGGTACGTTTTTGGGGACGATGACACGCTCTTCTTCCCTCAGAATGTGGTCAAAACGCTCTGCAAATATGATCACAGGCTTTGGTACTACGTTGGTGCTAACTCCGAGAGTTATAAGCAGACATGGTTTTTTGGATTTGGAATGGGATTTGGTGGGGCCGGTTTTGCTATCAGTTCGTCTCTGGCAACAGTCTTGGTCAAGGTCTTTGATTCTTGCATAGAAAGGTACCCAGAACTGTATGGAAGTGATGCCAGGGTCTACGCTTGCATAACAGAACTAGGTGTAGGATTAACACATGAACCCGGTTTTCACCAGGTTGATTTAAGGGGAAATGCCTTTGGCCTATTGGCTGCACATCCATTAACACCCTTGTTGTCCCTGCATCACTTGGACAACATTGATCCAATTTTTCCCAACATGACAATCATAAAAGCTCTGCAACATTTATATGAAGCGGCTAAAGTTGATTCCCAGAGGCTTCTACAACAAACAGTTTGTTATGACAAACGGTTGTCATGGACAATCTCGGTGTCTTGGGGCTATGCTGCCCAAGTGTTCCATAACCATTTGTCTTTGCCAGATGTTGTCAGAGTTCAAAAAACATTCAAGCACTGGACCAGAGGAACTGCTTTGGCAGACCAATTTACTTTTGACACCAAAGAACTTCACACTGACCCATGTAGAAGGCCCACCATATTCTATTTGGAAAATTTGTCCCGTGGTGAAGATGGCATAATAATAAGCAATTACCGGAAATCTATCCAAAATTGCTCATCCAATGTGGCACCTGAAGTTATCAGAGTGGCCTCAAGTAAGCTAGAGCTTGGCATCAAACAGTTGCTGGCTCAAAGAAGGCACTGTTGTGATGTGTTGCCCTCTAGCGTTTCTGACCAAATGGAGATTGCAATAAGGGAATGCAAAGAGGATGAATTGATTAGCATGCAATGA 1431 0.4396 MQSLHKIATTQTLINLVLVSSSFCAIYILVSVVLLGTPSKLENLHSSSHNVYESKTTTTLDHLVFGIASSRSSWPKRKEYVKLWWNTIRNTTMRGCVFVDTLPQDKDNNNNASTLPPLCVSQDTSRFRYTYSGWGGGMRSAIRVARVVKETVARMNHSHIRWYVFGDDDTLFFPQNVVKTLCKYDHRLWYYVGANSESYKQTWFFGFGMGFGGAGFAISSSLATVLVKVFDSCIERYPELYGSDARVYACITELGVGLTHEPGFHQVDLRGNAFGLLAAHPLTPLLSLHHLDNIDPIFPNMTIIKALQHLYEAAKVDSQRLLQQTVCYDKRLSWTISVSWGYAAQVFHNHLSLPDVVRVQKTFKHWTRGTALADQFTFDTKELHTDPCRRPTIFYLENLSRGEDGIIISNYRKSIQNCSSNVAPEVIRVASSKLELGIKQLLAQRRHCCDVLPSSVSDQMEIAIRECKEDELISMQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3207 476 Gene3D - 50 292 - -
Gso11g3207 476 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 7 475 - -
Gso11g3207 476 Pfam Protein of unknown function, DUF604 201 449 IPR006740 -
Gso11g3207 476 Coils Coil 304 324 - -
Gso11g3207 476 PANTHER FRINGE-RELATED 7 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3207 Gso-Chr11 47855883 47858252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3207 13 442 Glycosyltransferase AT1G05280 50.685 4.40e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3207 - - gmx:100778878 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0835 12 9011452 9013798 Gso11g3207 11 47855883 47858252 PCT
Gso6g2485 6 46615412 46618067 Gso11g3207 11 47855883 47858252 PCT