Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0835 ATGCAGCTTTTTCACAAACCCACCAAGGGCCAGTCTCTGGTTAATTTGATCTTGGTTTCTTCATCGTTCTGTGCCCTCTACCTCATTGTATCAGTGCTGCTTTTGGGGCCTTCAAAGCTAGTTCATGTGAATAGGTCATCACAAGATGTGTCCACACCAACCACCATTGATCACCTTGTGTTTGGAATTGCTTCAAGCACGAGTTCGTGGGGCAAGAGGAAGGAGTACGTGAAGCTGTGGTGGAACAACACCAATACCAAGAAAGCAATGAAGGGGTGTGTGTTTTTGGATAGTCTCTCGGACGAAGACAATGCTAGGAATGCGAATGATACTTCTCTTCCTCCTCTCTGTGTCTCTCAGGACACTTCACGGTTTCGTTTCACTCACAAGGGTGGTCTGCGCTCAGCAATACGCGTGGCGCGTGTTGTTGCGGAGACCGTGGCGCTGTACAATGATTCGGACGTGAGGTGGTATGTGTTTGGAGACGATGACACGGTTTTCTTCCCGGAGAATGTGCAGAAGACGCTTTCCAAGTATGATCATGAGCTTTGGTACTATATTGGTGCACACTCTGAGGTTTATGAGCAGAACCGGGTGTTTGGTTTTGGAATGGCTTTTGGGGGTGCAGGTTTTGCTATCAGCTCCTCTCTGGCTAAGGTCTTGGCCAAGGTTTTTGATTCGTGTATTGAAAGGTACCCTCATCTCTATGGAAGTGATGGCAGGGTGTACTCTTGCTTGGCAGAACTTGGGGTAGGATTAACACATGAACCCGGTTTTCACCAGGTAGATTTAAAGGGAAATACCTTTGGCCTATTGGCGTCGCATCCTTTAACTCCTCTGTTGTCGCTGCATCATCCTGATTACACTGATCCAATCTTTCCAAACATGACAACTAAACAAGCTCTGAACCATTTATTAGAAGCTGTAAATGTGGATTCCCAGAGGATGCTGCAACAAGCAATATGCTATGACAAATGGTTTTCATGGACAGTTTCAGTGTCATGGGGATACGCTGTTCAGGTTTTCCCAAACCATATGCTTTTGCCAGATGTTCTGAAGGTGCAAGAGACATTCAAGCAGTGGAGGAAGGGAAACATGCTGGCAAAATCATATACTTTCAACACAAGAGAACTTCACCCTGACCCTTGTAAAAGATCCACTGTTTTCTTTCTAGACAATGTGTCTTCTGGCAAGGATGGCATCATTAGCAGTTACAAGAAATCTTTTCAGAATTGCTCAATCGATGACGTATCACCAAAGAAACTGGAAGTGATCAAAGTGGTCACAAATAGGCTAGACCTTGACATCAAACAGTTGCATGCTCCAAGAAGGCATTGTTGTGATGTTTTGCACTCTACTGCCCGGGACAAAATGGAAATTGCAATAAGGGAATGCGAAGATGAAGAATTGGTTTACATGCACTGA 1425 0.4512 MQLFHKPTKGQSLVNLILVSSSFCALYLIVSVLLLGPSKLVHVNRSSQDVSTPTTIDHLVFGIASSTSSWGKRKEYVKLWWNNTNTKKAMKGCVFLDSLSDEDNARNANDTSLPPLCVSQDTSRFRFTHKGGLRSAIRVARVVAETVALYNDSDVRWYVFGDDDTVFFPENVQKTLSKYDHELWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNTFGLLASHPLTPLLSLHHPDYTDPIFPNMTTKQALNHLLEAVNVDSQRMLQQAICYDKWFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFKQWRKGNMLAKSYTFNTRELHPDPCKRSTVFFLDNVSSGKDGIISSYKKSFQNCSIDDVSPKKLEVIKVVTNRLDLDIKQLHAPRRHCCDVLHSTARDKMEIAIRECEDEELVYMH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0835 474 Pfam Protein of unknown function, DUF604 196 447 IPR006740 -
Gso12g0835 474 Gene3D - 46 305 - -
Gso12g0835 474 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 472 - -
Gso12g0835 474 PANTHER FRINGE-RELATED 10 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0835 Gso-Chr12 9011452 9013798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0835 13 439 Glycosyltransferase AT1G05280 54.358 3.70e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0835 - - gmx:100813816 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0835 12 9011452 9013798 Gso12g0835 12 9011452 9013798 ECH
Gso12g0835 12 9011452 9013798 Gso6g2485 6 46615412 46618067 GST
Gso11g3208 11 47861935 47864280 Gso12g0835 12 9011452 9013798 PCT
Gso12g0835 12 9011452 9013798 Gso11g3207 11 47855883 47858252 PCT