Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3208 ATGATAATCTGCAATGCACAACTTCATCTAGCTCCCTCCTTAATCATGAAGTCAATTCACAAACCTATCAAAACCAAACCCCTGATGAAATTCATTTTAGTCTCCTCTTCATTTTGTGCCATTTCTCTGTGTGTATCAGTGTTACTCCTAGCCACACCAAAGGTAGTAGAGGTGGGTTCTTCACCACAATATGTGTCTGATCCCACCACTGTTGATCATCTTGTGTTTGGAATTGCATCAAGTGGAATTTCATGGCCTAAGAGGAAGGAATACAGCAAGATCTGGTGGAATTGGAAACTCAATAAAACAATGAGAGGATGTGTTTTCGTAGATACACTTCCACATGAAGAAAATGCCAACAACAACAATGATGGTTCTCGTCCTCCTCTCTGTGTCTCTGAAGACACTTCACAGTTTTTCTACACTTACAAGCCTGGTGGTCTCCGATCAGCAATCCGCGTGGCACGTGTTGTGAAAGAGACTGTGGCTTTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGGGATGATGACACCATTTTCTTCCCTCAGAATTTGGTCAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTACGTTGGGTCGTACTCAGAGATTTATGAGGGCTCCCAGGTTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTCCTCTCTAGCACAAGTCCTAGCCAAGGTTTTTGATTCATGCATACAAAGGTATTCTCATCTATATGGAAGTGATGCCAGGGTGTACTCTTGCATAACAGAACTAGGTGTGGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGAGGGGAGATATATTTGGCCTATTGGCAGCACATCCATTAACTCCCTTGGTGTCCCTACATCACCCAGATCACACTGATCCTATCTTTCCTAACATGACAACTACAAAATCTCTGCAACATTTATTTGAAGCCGTTAATGTTGATTCCGAGAGGATCCTACAACAAACAGTTTGTTATGAAAGGAGGTTTTCATGGACAATTTCAGTGTCATGGGGCTATGGTGTTCAAGTGTTCCAGAACAACATGCTTTTGCCAGATGTTCTAAGAGTGGAAAAAACATTCAAGCAATGGAAGGAAGGAAATGTTTTGGCAGGAATATATACTTTCAATACAAGAGAACTTCACCCAGACCAATGTAAAAGACCCACCATTTTCTATCTTGATAAAGTGTCTTCTAGCAAAGATGGCATCATAAGCAGTTACAGGAAATATTCTCAAAATTGCTCATACAAGGAACCAATGAAGAAATTGGAGGTGATCAAAGTGTTTACAAATAAGTTATACCTTGACAATAAACAGATTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTAACGCTGGTGACTCAATGGAAATTGCAATCAGAGAATGCAAATATGAAGAAATGATTTACATGCACTAG 1458 0.4053 MIICNAQLHLAPSLIMKSIHKPIKTKPLMKFILVSSSFCAISLCVSVLLLATPKVVEVGSSPQYVSDPTTVDHLVFGIASSGISWPKRKEYSKIWWNWKLNKTMRGCVFVDTLPHEENANNNNDGSRPPLCVSEDTSQFFYTYKPGGLRSAIRVARVVKETVALNHSGVRWYVFGDDDTIFFPQNLVKTLSKYDHRLWYYVGSYSEIYEGSQVFGFGMAFGGGGFAISSSLAQVLAKVFDSCIQRYSHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGDIFGLLAAHPLTPLVSLHHPDHTDPIFPNMTTTKSLQHLFEAVNVDSERILQQTVCYERRFSWTISVSWGYGVQVFQNNMLLPDVLRVEKTFKQWKEGNVLAGIYTFNTRELHPDQCKRPTIFYLDKVSSSKDGIISSYRKYSQNCSYKEPMKKLEVIKVFTNKLYLDNKQIPRRHCCDVLPSNAGDSMEIAIRECKYEEMIYMH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3208 485 Pfam Protein of unknown function, DUF604 213 458 IPR006740 -
Gso11g3208 485 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 22 483 - -
Gso11g3208 485 PANTHER FRINGE-RELATED 22 483 - -
Gso11g3208 485 Gene3D - 62 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3208 Gso-Chr11 47861935 47864280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3208 68 452 Glycosyltransferase AT1G05280 55.725 5.55e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3208 - - gmx:100779943 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3208 11 47861935 47864280 Gso12g0835 12 9011452 9013798 PCT
Gso11g3208 11 47861935 47864280 Gso6g2485 6 46615412 46618067 PCT
Gso12g0834 12 9005874 9010429 Gso11g3208 11 47861935 47864280 PCT