Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2474 ATGCCTGAGGCTCCTAGCCACTACCTTTGCAACAAGCCAAATGGAAAACTTGATGATGGTGGTGCTACTAATACTAGCATCATCATCGAGCACAACAATAAGAAAGCACTCAAATACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGAAAAGGGTCCTTGCTGAGATCCTTTCTTGTAGTGCACACGTTGAGTACCTTCAACGCCATGGCTTGGAGGGGCGCACGGATAGAGAAACATTCAAGAAGATCATGCCTGTGGTGACATACGAGGATTTAAAGCCAGATATTGATCGTATTGCTAATGGTGATGCCTCCCCAATTTTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGAGGGGAGAGAAAACTGATGCCAACCATAGAAGACGAGCTAGAGCGAAGATCATTGCTCTACAGCCTCTTGATGCCAGTGATGGACCAATTCGTACCAGGTTTAGACAAAGGCAAAGGAATGTACTTTTTGTTCATAAAATCAGAATCCAAAACCCCTGGTGGACTCTTAGCTCGTCCAGTTTTAACAAGTTACTACAAAAGCTCACACTTCAAGAACAAAACACACGGTTTAAATTTTGACCCTTACACAAACTACACTAGCCCCATTGAGACCATTCTCTGCCAAGACTCTTACCAAAGCATGTACTCTCAAATGCTTTGTGGACTTTCTCAAAACGAGCATGTTCTCCGTGTTGGTTCTGTTTTTGCCTCAGGTTTCATCCGTGCCCTCAAGTTCTTAGAAAAACACTGGGAAAGTTTGTGTCATGACATAAGAAATGGCACCATTGACCATGAAATCACTGATTCAACCGTGAGAGAGGCCATCATGAAAATACTCAAACCAAACCCAAAACTTGCGGATTTTATAGAGGGTGAGTGCAAGAAGGGTTTGTGGAAAGGGATCATTACTAGGTTGTGGCCTAATACCAAGTATGTTGATGTTATTGTGACTGGAACCATGGCTCAGTATATTCCTATGTTGGATTACTATAGCAATGGTCTTCCTCTCGTTTGCACCATGTATGCTTCTTCTGAGTGTTATTTTGGACTCAACTTGAACCCTTTGTGTGATCCTAGTGAGGTGTCTTACACCCTTGTTCCCACCATGGCTTACTTTGAGTTCTTGCCACTTAATAAGATGAAGGGACATGCCAATTCAATTTCTCACACCGAGCAGGAACTTTTGGTTGATCTTGTGGATGTGGAGCTGGATCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTCTACAGGTACCGGGTTGGCGACATCCTCCGTGTGGCAGGATTCAAGAACAACGCTCCTCAATTCAACTTCGTGTGCCGAAAGAACGTTGTTCTGAGCATTGATTCCGACAAGACCGACGAGGTTGAGCTACAAAACGCAGTGAAGAATGGAGCCAAGCACCTTGCAACACTGGGTGCATCACTCACAGAATACACAAGCTGCGCTGACACGTCCACTATACCAGGCCACTACGTACTATACTGGGAAATTAACATGAACAATAATGATCAAACCCCAATTCCAAGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTCTCTCAACAGCGTGTATAGACAAGGAAGAGTTTCCGAGTCCATTGGGCCATTGGAAATCAAGATTGTGGAGAACGGAACTTTTGATAAGCTTATGGACTTTGCTCTTAGCCAGGGTGCGTCTATAAATCAGTATAAGACACCTCGTTGTGTGAAGTATGCTCCCATTGTTGAGCTTCTTGACTCCAAGACTGTTTCCAATTACTTCAGTCCAAAATGTCCACAGTGGGTTCCTGGTCACAAGAAGTGGTGCATGTACCCTTGA 1875 0.4395 MPEAPSHYLCNKPNGKLDDGGATNTSIIIEHNNKKALKYIEDVTSNADEIQKRVLAEILSCSAHVEYLQRHGLEGRTDRETFKKIMPVVTYEDLKPDIDRIANGDASPILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSESKTPGGLLARPVLTSYYKSSHFKNKTHGLNFDPYTNYTSPIETILCQDSYQSMYSQMLCGLSQNEHVLRVGSVFASGFIRALKFLEKHWESLCHDIRNGTIDHEITDSTVREAIMKILKPNPKLADFIEGECKKGLWKGIITRLWPNTKYVDVIVTGTMAQYIPMLDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLVPTMAYFEFLPLNKMKGHANSISHTEQELLVDLVDVELDQEYELVVTTYAGLYRYRVGDILRVAGFKNNAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGAKHLATLGASLTEYTSCADTSTIPGHYVLYWEINMNNNDQTPIPSSVFEECCFAVEGSLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLDSKTVSNYFSPKCPQWVPGHKKWCMYP* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2474 624 Pfam GH3 auxin-responsive promoter 40 589 IPR004993 -
Gso6g2474 624 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 25 620 IPR004993 -
Gso6g2474 624 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 25 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2474 Gso-Chr6 46453422 46457561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2474 25 607 EF-hand Containing Proteins AT1G23160 50.085 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2474 K14487 - gmx:100783196 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0848 12 9268131 9272119 Gso6g2474 6 46453422 46457561 GST
Gso12g1669 12 40283481 40287782 Gso6g2474 6 46453422 46457561 PCT
Gso11g3192 11 47729366 47733833 Gso6g2474 6 46453422 46457561 PCT
Gso6g2474 6 46453422 46457561 Gso12g1669 12 40283481 40287782 PCT
Gso6g2474 6 46453422 46457561 Gso11g3192 11 47729366 47733833 PCT