Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0848 ATGCCTGAGGCTCATAGCCACTACCTTTGCAACAAGCCAAATGGCAAACATGATGGTGCTACTAATACTAGTAGCATCATCGAGCACAACAACAAGAAAGCTCTGAAATACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGAAAAGGGTCCTTGCTGAGATCCTTTCTTCTAGTGCACATGCTGAGTACCTTCAACGCCATGCCTTGGATGGACGCACAGACAGAGAAACTTTCAAGAAGATCATGCCTGTGGTGACATACGAGGATTTAAAGCCAGATATTGATCGCATTGCTAATGGTGATACCTCCCCAATTTTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACCATAGAAGAGGAGCTAGAGCGAAGATCATTACTCTACAGCCTCCTGATGCCAGTGATGGAGCAATTCGTACCTGGTCTAGACAAAGGCAAAGGAATGTACTTTCTGTTCATAAAATCAGAAGCCAAAACCCCTGGTGGACTCTTAGCTCGTCCAGTTTTAACAAGCTACTACAGGAGCTCACACTTCAAGAACAAAACACATTGTTTTGACCCTTACACAAACTACACTAGCCCCATTGAGACCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCTCAAATGCTCTGTGGACTTTCACAAAACGAGCATGTTCTCCGTGTTGGTGCTGTTTTCGCCTCAGGTTTCATCCGTGCCCTTAAGTTCTTGGAAAAGCATTGGGTGTGTTTGTGCCGTGACATTAGAAATGGCACCATTGGCCCTGAAATCACTGACTCATCCGTTAGAGAAGCCATCATGAGGGTACTCAAACCAAACCCAAAACTTGCGGATTTTATAGAGGGTGAGTGCAAGAAGGGGTTGTGGAAAGGGATAATTACTAGGTTGTGGCCTAATACCAAGTACGTTGATGTTATTGTGACTGGAACCATGGCTCAGTATATTCCTATGTTGGATTACTATAGCAATGGTCTCCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTATTTTGGACTCAACTTGAACCCTTTGTGTGATCCTAGTGAGGTGTCTTATACCCTTGTTCCCACCATGGCTTACTTTGAGTTCTTGCCCCTTAATAAGACGAAGGAACATGCGAATTCAATTTCTTACACCGAGCAGGAACTTTTGGTTGATCTTGTGGATGTGGAGCTGGGGCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTTTACAGGTACCGGGTCGGCGACATCCTCCGTGTAGCAGGATTCAAGAACAATGCTCCTCAATTCAATTTCGTGTGCCGAAAGAACGTGGTTCTTAGCATTGATTCCGACAAGACCGATGAGGTTGAGCTACAAAACGCTGTGAAAAATGGAGCCAACCACCTTACACTATTCGGTGCATCACTCACAGAATACACAAGCTTTGCTGATACGTCCACTATCCCTGGCCACTATGTACTATACTGGGAAATCAGCATGAACAAGAACAACAACATTGATCAAAATCAAAACCCAATTCCAAGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTCTCTCAACAGCGTGTATCGACAAGGAAGAGTATCAGAGTCCATTGGGCCATTGGAAATCAAGATTGTGGAGAATGGAACTTTTGATAAGCTTATGGACTTTGCTCTTAGCCAGGGTGCGTCTATAAATCAGTACAAGACACCTCGTTGTGTGAAGTATGCTCCCATTGTTGAGCTTCTTGACTCGAAAACTGTTTCCAATTACTTCAGTCCAAAATGTCCACTGTGGGTTCCTGGTCACAAGAAGTGGTGCATGTACCCTCTTGACAACAAATAA 1890 0.4413 MPEAHSHYLCNKPNGKHDGATNTSSIIEHNNKKALKYIEDVTSNADEIQKRVLAEILSSSAHAEYLQRHALDGRTDRETFKKIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMEQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYRSSHFKNKTHCFDPYTNYTSPIETILCLDSYQSMYSQMLCGLSQNEHVLRVGAVFASGFIRALKFLEKHWVCLCRDIRNGTIGPEITDSSVREAIMRVLKPNPKLADFIEGECKKGLWKGIITRLWPNTKYVDVIVTGTMAQYIPMLDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLVPTMAYFEFLPLNKTKEHANSISYTEQELLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNNAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGANHLTLFGASLTEYTSFADTSTIPGHYVLYWEISMNKNNNIDQNQNPIPSSVFEECCFAVEGSLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLDSKTVSNYFSPKCPLWVPGHKKWCMYPLDNK* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0848 629 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 23 621 - -
Gso12g0848 629 Pfam GH3 auxin-responsive promoter 38 590 IPR004993 -
Gso12g0848 629 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 621 IPR004993 -
Gso12g0848 629 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0848 Gso-Chr12 9268131 9272119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0848 23 608 EF-hand Containing Proteins AT1G23160 49.406 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0848 K14487 - gmx:100819676 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0848 12 9268131 9272119 Gso12g0848 12 9268131 9272119 ECH
Gso12g0848 12 9268131 9272119 Gso6g2474 6 46453422 46457561 GST
Gso12g1669 12 40283481 40287782 Gso12g0848 12 9268131 9272119 PCT
Gso11g3192 11 47729366 47733833 Gso12g0848 12 9268131 9272119 PCT
Gso12g0848 12 9268131 9272119 Gso12g1669 12 40283481 40287782 PCT
Gso12g0848 12 9268131 9272119 Gso11g3192 11 47729366 47733833 PCT