Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3192 ATGTTTGGTTCCTCACTCCGAAACTCAATAGCTATTAATTCTTTAGCCATGCCTGAAGCTCCAAAGCACTTATGCCACGATCCAAAGGATAACCTTGATGATGATGATGATGGTAGTAATAACAACAATAAGAGAGCACTCGAATACATTGAGGAGGTCACCACCAACGCTGATGAAATTCAAGAAAAGGTGCTTGCCCAGATCCTTTCTCGAAGTGCAAACGCTGAATACCTCCAACGCCATGGCCTAGAAGGACGCACTGACAGAAACACCTTCAAGAATATCATGCCCGTGGTCACTTACGAGGATTTAAAGCCAGATATTGATCGTATAGCCAATGGTGATACCTCCCCAATTTTATGCTCCAAACCCATATCAGAGTTCCTCACTAGCTCTGGGACTTCTGGTGGGGAGAGAAAATTGATGCCAACCATAGAAGAGGAGCTAGAGAGGAGATCAATGCTTTATAGCCTCTTGATGCCAGTGATGGATCAGTTTGTGCCCGATTTGGACAAAGGCAAAGGCATGTACTTTTTGTTCACAAAATCAGAAGCCAAAACCCCTGGTGGACTCCTTGCTCGTCCAGTTTTGACAAGCTATTACAAAAGCTCACATTTCAAGCACCGCAAACACGATCCCTACACAAACTACACAAGCCCCAATGAAACCATTCTCTGCCATGACTCTTACCAAAGCATGTACTCTCAGTTACTTTGTGGCCTTTACCAAAACGAGGAAGTTCTTCGTGTTGGCGCAGTCTTCGCCTCAGGTTTCATTCGTGCCCTTAAGTTCCTCGAAAAACACTTTGTTTGTTTGTGCAATGACATAAGAACTGGTACCTTAGACGCCAAAATCACTGACCCTTCTGTGAGAGAGGCTGTTATGAAAGTACTCAAACCAAATCCCACGCTTGCGGATTTCGTAGAAACTGAATGCATGAAGGGGTCATGGAAGGGAATTATTACTAGGATATGGCCCAACACCAAGTATGTTGATGTTATTGTCACGGGAACCATGTCTCAGTACATTCCCATATTGGATTATTATAGCAATGGTCTCCCTCTTGTGTGCACCATGTATGCTTCTTCTGAGTGCTATTTTGGCCTCAATTTGAACCCCTCGTGTGATCCAAGTGAGGTAGCTTACACCCTTATTCCTACCATGGCTTACTTTGAGTTCTTGCCCCTCGATGAGATCAACGGACATACTAATTCAATTTCTCAACTGGAGCAAGAGCATTTGGTGGATCTTGCAGATGTGAAGTTGGGTCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGATACCGGGTTGGTGACATTCTCCGTGTAGCCGGATTCAAGAACAAGGCTCCTCAATTCAACTTCGTGTGCCGAAAGAACGTGGTTCTGAGCATTGACTCTGACAAAACCGACGAAGTTGAGCTACATAATGCAGTGAAGAGTGGAGCTGAGCATCTTGCTGAATTCAATGCATCTCTAACAGAATACACAAGCTGCGTGGACACATCAACCATCCCTGGCCACTACGTTCTGTACTGGGAAATTAGCACAAATGACCATACCCCAACAATTCCTTCTTCCGTTTTTGGGCATTGTTGCCTTTCGATTGAGGAGTCTCTAAACAGCGTGTATCGCCAAGGAAGGGTGTCAGAGTCTATTGGACCATTGGAAATTAAGGTGGTTGAGAATGGCACATTTGACAAGCTCATGGACTTTGCTCTCAGCCAGGGTGCGTCCATTAACCAATACAAGACTCCTCGTTGCGTCACATATGCGCCCATTCTGGACCTTCTAAACTCTAAAGTGTTGTCCAGTTACATTAGCCCAAAATCCCCAAATTGGGTTCCTGGTCACAAGGACTGGTGCACTCTTCATTGA 1890 0.4487 MFGSSLRNSIAINSLAMPEAPKHLCHDPKDNLDDDDDGSNNNNKRALEYIEEVTTNADEIQEKVLAQILSRSANAEYLQRHGLEGRTDRNTFKNIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSMLYSLLMPVMDQFVPDLDKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKHRKHDPYTNYTSPNETILCHDSYQSMYSQLLCGLYQNEEVLRVGAVFASGFIRALKFLEKHFVCLCNDIRTGTLDAKITDPSVREAVMKVLKPNPTLADFVETECMKGSWKGIITRIWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPSCDPSEVAYTLIPTMAYFEFLPLDEINGHTNSISQLEQEHLVDLADVKLGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELHNAVKSGAEHLAEFNASLTEYTSCVDTSTIPGHYVLYWEISTNDHTPTIPSSVFGHCCLSIEESLNSVYRQGRVSESIGPLEIKVVENGTFDKLMDFALSQGASINQYKTPRCVTYAPILDLLNSKVLSSYISPKSPNWVPGHKDWCTLH* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3192 629 Pfam GH3 auxin-responsive promoter 50 594 IPR004993 -
Gso11g3192 629 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 35 625 IPR004993 -
Gso11g3192 629 Coils Coil 43 63 - -
Gso11g3192 629 MobiDBLite consensus disorder prediction 21 43 - -
Gso11g3192 629 MobiDBLite consensus disorder prediction 22 42 - -
Gso11g3192 629 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 35 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3192 Gso-Chr11 47729366 47733833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3192 47 612 EF-hand Containing Proteins AT1G23160 49.913 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3192 K14487 - gmx:100818961 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1669 12 40283481 40287782 Gso11g3192 11 47729366 47733833 GST
Gso11g3192 11 47729366 47733833 Gso12g0848 12 9268131 9272119 PCT
Gso11g3192 11 47729366 47733833 Gso6g2474 6 46453422 46457561 PCT
Gso12g0848 12 9268131 9272119 Gso11g3192 11 47729366 47733833 PCT
Gso6g2474 6 46453422 46457561 Gso11g3192 11 47729366 47733833 PCT