Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2433 ATGCCGCAGCACCAACCAACTCTAATGGAACCTGTTCTCAGCTACAACAATGGCAATGGCAACAACAGTGACTATGATGTCATGAACTGGTTTGAGGATTTATCTCAAAACGCTGGTTTTGTTCAGACTCAGTTGCTGTGCCAGATTCTGGAGCAGAACTATGGGGTGGAATATCTCAAGAAATGGTTGGGGAGCTACAACATCCTTGAGATGGATGCATGTGCATTGGAATCACTTTTCTCTTCTGTGGTTCCCCTTGCTTCACATGCTGATTTTGAACCATTTATGCAACGGATTGCAGATGGGGACACAACTCCTTTACTTACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGGAGGCAGAAGTTCGTACCATTTACCCGCCATAGTGCACAAACCACGCTTCAAATATTCACCTTAGCTGCAGCATATAGATCAAGGGTTTATCCAATAAGGGAAGGTGGAAGGGTTCTTGAATTCATATACAGCAGCAACAGGTTCAAAACAAAAGGAGGTTTAACAGTAGGAACCGCTACAACACACTACTATGCTAGTGAAGAATTCAAAATCAAGCAGCACAAGACCAAGTCATTCACTTGTAGCCCTCAAGAAGTGATTTCTGGTGGAGACTACAAGCAATCCACATATTGTCACCTTCTTCTTGGCCTATACTTCTCTGACCAAGTTGAGTTTATAACCTCAGCTTTTATCTACAGCATGGTGCAAGCTTTCACCACTTTTGAGGAACTTTGGAGAGAAATTTGCAATGACATAAGAGATGGAACTCTTAGCTCAAGAATCAAGTCATCCAAAATGAGAAAGGCTGCTTTGGATATCATCTCTCCAAGCCCAAATTTGGCCTCAAAGTTAGAAGATTCTTGCAAGGAGCTAGAAGGGGTGGATTGGTTTGGTTTGATTCCAAAACTTTGGCCAAATGCAAAGTATGTTTATTCCATAATGACAGGGTCCATGCAACCATATTTGAAAAAACTTAGGCACTATGCAAATGGGTTGCCTTTGGTTAGTGCTGAATATGGCTCAACTGAGAGCTGGATAGGGGTTAATGTTGACCCTAGTTTGCCACCAGAAGATGTAACATTTGCTGTGGTTCCCACTTTCTCTTACTTTGAGTTCATTCCACTTCACAGGCATGAAAAAAAATTGAGTTCAGGAGGTGATGATTTCATGGAAGATAAGCCAATTCCACTGTCTCAGATCAAAGTTGGACAAGAATATGAAGTAGTCCTCACAACTTTCACGGGACTGTACAGGTGCAGGTTAGGGGATGTGGTGGAAGTAGCCAGCTTCCACAATGGGATCCCAAAGTTGAACTTTGTGTGCAGAAGAAAGTTAATTCTGACAGTAAATATAGACAAGAACACAGAAAAGGACCTTCAGCTAGTGGTAGAGAGAGGGTCTCATATTCTGAACAAGGCAAGTAGAGCTGAGCTAATTGATTTCACAAGCTATGCAGATGTCTCAAACCAACCGGGTCACTACGTAATTTACTGGGAGATCAAAGGAGAAGTTGAGGACAATGTTCTTGGTGCATGCTGCAACGAAATGGACAAGTCTTTTGCGGATCATGGCTATGTTGTGTCAAGGAAAACCAACTCGATAGGACCCTTGGAGCTTTGCGTTTTGGAGAGTGGGACTTTCAAGAAGATCTTGGACAACTTCATTGCTAATGGGGCAGCACTTAGCCAATTCAAGACACCCAGGTGCACCAATAATCATGTCATCCTCAAAATTCTTAACACGTGCACCACCAAAAAGTTTCGGAGCACTGCTTACAACAACTGTTCAAATGAACAATGA 1836 0.4265 MPQHQPTLMEPVLSYNNGNGNNSDYDVMNWFEDLSQNAGFVQTQLLCQILEQNYGVEYLKKWLGSYNILEMDACALESLFSSVVPLASHADFEPFMQRIADGDTTPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRVLEFIYSSNRFKTKGGLTVGTATTHYYASEEFKIKQHKTKSFTCSPQEVISGGDYKQSTYCHLLLGLYFSDQVEFITSAFIYSMVQAFTTFEELWREICNDIRDGTLSSRIKSSKMRKAALDIISPSPNLASKLEDSCKELEGVDWFGLIPKLWPNAKYVYSIMTGSMQPYLKKLRHYANGLPLVSAEYGSTESWIGVNVDPSLPPEDVTFAVVPTFSYFEFIPLHRHEKKLSSGGDDFMEDKPIPLSQIKVGQEYEVVLTTFTGLYRCRLGDVVEVASFHNGIPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSHILNKASRAELIDFTSYADVSNQPGHYVIYWEIKGEVEDNVLGACCNEMDKSFADHGYVVSRKTNSIGPLELCVLESGTFKKILDNFIANGAALSQFKTPRCTNNHVILKILNTCTTKKFRSTAYNNCSNEQ* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2433 611 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 21 605 - -
Gso6g2433 611 Pfam GH3 auxin-responsive promoter 30 584 IPR004993 -
Gso6g2433 611 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 21 605 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2433 Gso-Chr6 46002490 46007558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2433 26 602 EF-hand Containing Proteins AT1G23160 35.811 3.54e-118 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2433 K14487 - gmx:100813472 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0892 12 10069324 10074757 Gso6g2433 6 46002490 46007558 GST
Gso12g1713 12 40723088 40727750 Gso6g2433 6 46002490 46007558 PCT
Gso11g3152 11 47386083 47390956 Gso6g2433 6 46002490 46007558 PCT
Gso6g2433 6 46002490 46007558 Gso12g1713 12 40723088 40727750 PCT
Gso6g2433 6 46002490 46007558 Gso11g3152 11 47386083 47390956 PCT