Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3152 ATGGAACCCCAAATTCTCGGTTACAACAACAATGGCAACTGCATCAGTGACTCTGATATCATTACCTGGTTTGAAGACGTGTCCAAGAACGCTGGTTCTGTTCAGACTCAGACACTGTGCAAGGTTCTGAAGCAGAACTGTGGGGTTGAATATCTAAAGAAATGGCTGGGGGACTACAATATCTCAGAAATGGATGCAAGTGCCTTGGAATCTCTTTTTACTTCTGTGGTTCCCCTTGCTTCACATAAAGATTTCGAGCCATATATCCGAAACATTGCAGATGGAGACACAGCTCCTATACTCACACAACAACCCATAACCACTCTTTCCTTAAGCTCTGGAACCACAGAGGGAAAGCAAAAGTTGGTACCCTTTACCCGCCATAGTGCTCAAACGACCCTTCAAACATTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTTATATACAGCAGCAACCAGTTCAAAACAAAAGGAGGCTTAACTGTTGGAACAGCCACAACACACTACTATGCAAGTGAAGAATTCAAAACCAAACAGGAGAAAACAAAGGCATTCACTTGCAGCCCCTATGAAGTAATTTCTGGAGGGGACTATAAACAATCCACGTATTGTCACCTCCTTCTTGGCCTTTTCTTCTCTGATCACGTAGAGTTTATTTCCTCAGCTTTTGTCTATGGCATAGTGCAAGCATTTTGCACCTTCGAAGAGGTTTGGAAAGACCTTTGCAATGACATAAGAGATGGCACTTTGAGTTCAAGAATCAAGTTACCCAAAATGAGAGAAGCTGTTTTGGGTATAATCACTTCAAACCCCTCTTTGGCCTCAAAACTAGAAGCAACTTGCTTGGAGCTAGAAGATGTGGATTGGTTTGGTTTGGTTCCAAAACTTTGGCCAAACGCAAAGTTCGTTTGTTCCATAATGACAGGCTCTATGCAACCATATTTGAAAAAGCTAAGGCATTATACAAATGGGGTGCCACTAATAAGTGGTGACTATGGTTCAACTGAGAGTTGGATAGGGGTTAATGTGGATCCTAGTTTGGCTCCAGAGAAAGTAACCTTTGCTGTAGTACCCACGTTTTCTTACTTTGAGTTCATACCACTTTATTATAGACAGAAACAAGGTTGCAGCTCAGTAGCTGATCATGATTTCATGGAAGAGGAGCCAATCCCACTATCCCAGGTTAAAGATGGCCAACAGTACGAAATAGTGCTCACAACTTTTACTGGGCTGTACAGGTGCAGACTAGGAGATGTGGTGGAAGTGGCAGGTTTTCACAATGGGAGCCCAAAATTGAACTTCATATGCAGAAGAAAACTAATTCTAACCGTGAATATAGACAAGAACACAGAGAGAGACCTTCAAATAGTGGTAGAGAAAGGGTCACAGCTCCTAAACAAGGCCAAAGCTGAGCTCGTTGATTTTACAAGCTATGCAGATGTCTCAAACCAGCCAGGTTGTTACGTCATTTTCTGGGAGATCAAAGGTGAGGCCGAGGATAAGGTACTTGAGGCATGCTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTGGTTGCAAGGAAAACCAGTTCAATAGGGCCTTTGATGCTGTGCATTGTAGAGAGAGGAACTTTTAAAAAGATTTTGGATTATTTCGTGGAGAATGGGGCAGGATTGGGCCAGTTCAAGACCCCCAGGTGCACTAACAACCCGGTTCTCCTCAAAATTCTTAGTGAATGCACCATTCAAACATTTCGCAGCACTGCTTATATATAG 1800 0.43 MEPQILGYNNNGNCISDSDIITWFEDVSKNAGSVQTQTLCKVLKQNCGVEYLKKWLGDYNISEMDASALESLFTSVVPLASHKDFEPYIRNIADGDTAPILTQQPITTLSLSSGTTEGKQKLVPFTRHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSNQFKTKGGLTVGTATTHYYASEEFKTKQEKTKAFTCSPYEVISGGDYKQSTYCHLLLGLFFSDHVEFISSAFVYGIVQAFCTFEEVWKDLCNDIRDGTLSSRIKLPKMREAVLGIITSNPSLASKLEATCLELEDVDWFGLVPKLWPNAKFVCSIMTGSMQPYLKKLRHYTNGVPLISGDYGSTESWIGVNVDPSLAPEKVTFAVVPTFSYFEFIPLYYRQKQGCSSVADHDFMEEEPIPLSQVKDGQQYEIVLTTFTGLYRCRLGDVVEVAGFHNGSPKLNFICRRKLILTVNIDKNTERDLQIVVEKGSQLLNKAKAELVDFTSYADVSNQPGCYVIFWEIKGEAEDKVLEACCREMDAAFVDHGYVVARKTSSIGPLMLCIVERGTFKKILDYFVENGAGLGQFKTPRCTNNPVLLKILSECTIQTFRSTAYI* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3152 599 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 15 598 - -
Gso11g3152 599 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 598 IPR004993 -
Gso11g3152 599 Pfam GH3 auxin-responsive promoter 23 578 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3152 Gso-Chr11 47386083 47390956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3152 18 596 EF-hand Containing Proteins AT1G23160 34.680 8.41e-117 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3152 K14487 - gmx:100810952 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1713 12 40723088 40727750 Gso11g3152 11 47386083 47390956 GST
Gso11g3152 11 47386083 47390956 Gso12g0892 12 10069324 10074757 PCT
Gso11g3152 11 47386083 47390956 Gso6g2433 6 46002490 46007558 PCT
Gso12g0892 12 10069324 10074757 Gso11g3152 11 47386083 47390956 PCT
Gso6g2433 6 46002490 46007558 Gso11g3152 11 47386083 47390956 PCT