Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1627 ATGGTGGCTGACAGGAGCAAGAAGCCGAAGGTCTCCGAGAAGGGCGAAAACCTCGATGAAATCGACGGAGAACTCGTCCTCTCTATCGAAAAGTTGCAGGAGATCCAAGACGAGCTCGAAAAGATCAATGAGGAAGCCAGTGACAAAGTGCTCGAAATAGAGCAGAAGTACAATGAGATACGGAAGCCCGTCTATGATAAGAGGAATGATATTATCAAGGCTATTCCCGATTTCTGGTTAACTGCTTTTTTGAGCCATCCTGCTCTTGGTGATCTTTTGAACGAGGAAGATCAGAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTTTAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATGCCAATCCCTATTTTGAGGATACAAAACTTGTAAAGACCTATACCTTCCTTGAAGAAGGAACAACTAAGGTTACTGCTACACCCATAAAATGGAAAGAGGGCAAGGGCATACCCAATGGAGTTAATCATGAGAAAAAAAGGAACAAGCGTGCTCCTACTGATGTCAGCTTCTTCAGTTGGTTTAGTGACACCGAGCAGAAAGATGATATAGATGACATTCATGATGAGGTTGCAGAATTGATCAAGGATGATTTATGGCCAAATCCACTTACTTATTTCAACAATGAAGAACCTGACGAAGAGGAAGGTGATGAGGATGAAGCTGATGATGAGGGAAAGGAGGATGAATCTGGTGATGATGATGACGATCAAGAGGAGGATGACGATGAGGGTGAGGAGGAGGATGACAAGTGA 792 0.423 MVADRSKKPKVSEKGENLDEIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIIKAIPDFWLTAFLSHPALGDLLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGTTKVTATPIKWKEGKGIPNGVNHEKKRNKRAPTDVSFFSWFSDTEQKDDIDDIHDEVAELIKDDLWPNPLTYFNNEEPDEEEGDEDEADDEGKEDESGDDDDDQEEDDDEGEEEDDK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1627 263 MobiDBLite consensus disorder prediction 221 263 - -
Gso6g1627 263 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 251 IPR002164 GO:0005634|GO:0006334
Gso6g1627 263 SUPERFAMILY NAP-like 9 220 IPR037231 -
Gso6g1627 263 Coils Coil 25 59 - -
Gso6g1627 263 Gene3D - 1 75 - -
Gso6g1627 263 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 251 - -
Gso6g1627 263 MobiDBLite consensus disorder prediction 212 263 - -
Gso6g1627 263 Gene3D Nucleosome assembly protein 76 223 - -
Gso6g1627 263 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Gso6g1627 263 Pfam Nucleosome assembly protein (NAP) 29 73 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1627 Gso-Chr6 17157962 17161995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1627 K11290 - gmx:100793432 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1627 6 17157962 17161995 Gso6g1627 6 17157962 17161995 ECH
Gso4g1424 4 42045607 42050483 Gso6g1627 6 17157962 17161995 GST
Gso6g1627 6 17157962 17161995 Gso5g0226 5 2364040 2367699 PCT
Gso6g1627 6 17157962 17161995 Gso17g0835 17 7848902 7852812 PCT