Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0226 ATGGTTGGCGACAACACGAAGAAGTTGATAGTCGCCGAGAATTTGGAGGATAGCATCGACGGCGAACTCGTCCTCTCCATCGAGAAGCTGCAAGAAGTCCAAGACGAGCTCGACAAGATCAATGAAGAGGCGAGTGATAAGGTCCTCGAAGTAGAACAGAAGTACAATGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGAGATCGTCAAATCTATTCCTGATTTCTGGTTCACTGCTTTTATGAGTCATCCTGCCCTTTGTGATCTTCTGAACGTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTTGATGTTGAAGATAATAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATCTCAATCCCTATTTTGAGAATGCAAAGCTTACAAAGACCTTTACCTTCCTTGAAGAAGGAACAACAAAGATAACTGCTACCCCCATAAAATGGAAAGAGGGCAAGGGATTACCCAACGGAGTTGAACATGACAAGAATGGGAAGAAGCGGGCTCGTATTGATATAAGTTTCTTTAGTTGGTTCAGTGACTGTGAGCAGAAAGGTGATATGGATGAAATTCATGACGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTCACTTATTTCAACAACGAGCTTGATGAAGAGGATGTTGAAGCTGATGATGAGGAAAACGATGAGGATGACTCTGAAGATGATGACCAAGAGGAGAATGACACTGGGAGTGAGGATGGCAATAACAGTTGA 771 0.415 MVGDNTKKLIVAENLEDSIDGELVLSIEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNEIVKSIPDFWFTAFMSHPALCDLLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNLNPYFENAKLTKTFTFLEEGTTKITATPIKWKEGKGLPNGVEHDKNGKKRARIDISFFSWFSDCEQKGDMDEIHDEVAELIKDDLWPNPLTYFNNELDEEDVEADDEENDEDDSEDDDQEENDTGSEDGNNS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0226 256 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 9 245 - -
Gso5g0226 256 Pfam Nucleosome assembly protein (NAP) 71 219 IPR002164 GO:0005634|GO:0006334
Gso5g0226 256 Pfam Nucleosome assembly protein (NAP) 27 71 IPR002164 GO:0005634|GO:0006334
Gso5g0226 256 MobiDBLite consensus disorder prediction 216 256 - -
Gso5g0226 256 Coils Coil 23 54 - -
Gso5g0226 256 MobiDBLite consensus disorder prediction 220 249 - -
Gso5g0226 256 Gene3D Nucleosome assembly protein 74 221 - -
Gso5g0226 256 Gene3D - 4 73 - -
Gso5g0226 256 SUPERFAMILY NAP-like 14 218 IPR037231 -
Gso5g0226 256 Coils Coil 221 241 - -
Gso5g0226 256 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 9 245 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0226 Gso-Chr5 2364040 2367699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0226 K11290 - gmx:100809531 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0226 5 2364040 2367699 Gso17g0835 17 7848902 7852812 GST
Gso4g1424 4 42045607 42050483 Gso5g0226 5 2364040 2367699 PCT
Gso6g1627 6 17157962 17161995 Gso5g0226 5 2364040 2367699 PCT