Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1424 ATGGTGGCTGACAGGAGCAAGAAGCCGAAGGTCTCCGACAAGGGCGAGAACCTCGATGAAATCGACGGAGAACTCGTCCTCTCCATCGAGAAGTTGCAGGAGATCCAAGACGAGCTTGAAAAGATCAACGAGGAAGCCAGTGACAAAGTTCTGGAAATAGAGCAGAAGTACAATGAGATACGGAAGCCCGTTTATGATAAGCGCAATGATATTATCAATGCTATTCCTGATTTCTGGTTAACTGCTTTTTTGAGTCATCCTGCTCTTGGTGATCTTTTGAACGAGGAAGATCAGAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTTTAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATGCCAATCCCTATTTCGAGGATACAAAACTTGTAAAGACTTATACCTTTCTTGAGGAAGGAACAACTAAGGTTACTGCTACACCCATAAAATGGAAAGAGGGCAAAGGCATACCCAATGGAGTTAATCATGAGAAAAAAGGGAACAAGCGTGCTCCTACTGATGTCAGCTTCTTTAGTTGGTTTAGTGACACTGAGCAGAAAGATGATATTGATGACATTCATGATGAGCAGGTTGCAGAATTGATCAAGGATGATTTATGGCCAAACCCACTTACCTATTTCAACAATGAAGAACCTGATGAAGAGGAAGGTGATGAGGATGAAGCTGATGATGAGGGAAAGGAGGATGAGTCTGATGATGATGACGACAATCAAGAGGATGACGATGAGGGTGAGGAGGATGTCAAGTGA 789 0.4195 MVADRSKKPKVSDKGENLDEIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIINAIPDFWLTAFLSHPALGDLLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGTTKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFSDTEQKDDIDDIHDEQVAELIKDDLWPNPLTYFNNEEPDEEEGDEDEADDEGKEDESDDDDDNQEDDDEGEEDVK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1424 262 Pfam Nucleosome assembly protein (NAP) 29 74 IPR002164 GO:0005634|GO:0006334
Gso4g1424 262 Pfam Nucleosome assembly protein (NAP) 74 222 IPR002164 GO:0005634|GO:0006334
Gso4g1424 262 Gene3D - 1 75 - -
Gso4g1424 262 Gene3D Nucleosome assembly protein 76 224 - -
Gso4g1424 262 SUPERFAMILY NAP-like 9 221 IPR037231 -
Gso4g1424 262 MobiDBLite consensus disorder prediction 222 262 - -
Gso4g1424 262 Coils Coil 25 59 - -
Gso4g1424 262 MobiDBLite consensus disorder prediction 210 262 - -
Gso4g1424 262 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 252 - -
Gso4g1424 262 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 252 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1424 Gso-Chr4 42045607 42050483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1424 K11290 - gmx:100808081 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1424 4 42045607 42050483 Gso6g1627 6 17157962 17161995 GST
Gso4g1424 4 42045607 42050483 Gso5g0226 5 2364040 2367699 PCT
Gso4g1424 4 42045607 42050483 Gso17g0835 17 7848902 7852812 PCT