Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0835 ATGGTTGGCGACAACACGAAGAAGTTGAAAGTCGCCGAGAATTTGGAGGATAGCATCGACGGCGAACTCGTCCTCTCCATCGAGAAGCTGCAAGAAGTCCAAGACGAGCTCGATAAGATCAATGAAGAGGCGAGTGATAAGGTCCTCGAAGTAGAGCAGAAGTACAATGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGATGTCGTCAAATCTATTCCTGATTTCTGGTTCACTGCTTTTATGAGTCATCCTGCCCTTTGTGAACTTCTGAACGTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTTGATGTTGAAGATAATAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGAATACAAAGCTTACAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAAGATAACTGCTACCCCCATAAAATGGAAAGAGGGCAATGGATTACCCAATGGACTTGATCATGACAAGAATGGGAACAAGCGGGCTCGTATTGATATCAGTTTCTTTAGTTGGTTTAGTGACTGTGAGCAGAAAGATGATGTGGATGAAATTCATGACGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTCACTTATTTCAACAATGAGCTTGATGAAGAGGATGTTGATTCTGAAGCTGATGATGAGGAAAACGATGAGGATGACTCTGAAGATGATGACCAAGAGGAGAATGACGCTGGGAGTGAGGATGGCAATCACAGTTGA 777 0.4118 MVGDNTKKLKVAENLEDSIDGELVLSIEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNDVVKSIPDFWFTAFMSHPALCELLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFLEEGTTKITATPIKWKEGNGLPNGLDHDKNGNKRARIDISFFSWFSDCEQKDDVDEIHDEVAELIKDDLWPNPLTYFNNELDEEDVDSEADDEENDEDDSEDDDQEENDAGSEDGNHS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0835 258 Coils Coil 23 54 - -
Gso17g0835 258 MobiDBLite consensus disorder prediction 212 258 - -
Gso17g0835 258 MobiDBLite consensus disorder prediction 220 250 - -
Gso17g0835 258 Gene3D - 3 73 - -
Gso17g0835 258 Gene3D Nucleosome assembly protein 74 221 - -
Gso17g0835 258 SUPERFAMILY NAP-like 13 218 IPR037231 -
Gso17g0835 258 Pfam Nucleosome assembly protein (NAP) 71 219 IPR002164 GO:0005634|GO:0006334
Gso17g0835 258 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 247 IPR002164 GO:0005634|GO:0006334
Gso17g0835 258 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0835 Gso-Chr17 7848902 7852812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0835 K11290 - gmx:100810307 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0226 5 2364040 2367699 Gso17g0835 17 7848902 7852812 GST
Gso4g1424 4 42045607 42050483 Gso17g0835 17 7848902 7852812 PCT
Gso6g1627 6 17157962 17161995 Gso17g0835 17 7848902 7852812 PCT