Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1585 ATGATGAAACGAAAGCTAGAAACCTTGGTGTGGCTAACACGAAAACGATCGATTCAGTTTCTAATCGGTGTTTTTTTCCTGTACCTCGTACTCGTTACACTCGAAATCCCGTTTGTTTTCAAAACCGACTTCGCAAGCGTGACCACCACGCGCCCCCCGAGGCTCCGAAGCGAGGAGGATTCGCTACGTAAAGAGTCCCCTGCGCGTCCTTTGAAAACGGTTTCCAACGCCGACTCGCCGAGTCAACTCGCTCACCGCCCCAACAGCAGTGTCGTTTCCGCGCTGGTGCTAAACGACGCCGCGTTCGACTCCCACGTAAACGACGGGTCGTCTGAACTCTACAAGCAAGTGAAGCACGCGCGCGAGGTTGGACGGAGTCTATGGGAACACCTCGAATCTGGAAAGCCGCTAACACGAACCGTTGCCGAGAACCGGCCCGGTTCGTGTCCCGGTTCGGTTTCGCTTTCTGGTTCGGATGTTGTTGACGTCTCGGGCGTCGTGCCGTTACCGTGTGGGCTCACATTGGGGTCCCACATAACGGTCGTTGGGAAGCCGTTGGCGGCGAAGCCCGATTTCGAGCCGAAGATAACGGTGGTGGCGGAGAACGAGCCGGTGATGGTGTCGCAATTCGTGGTGGAGTTGCAGGGGCTGAAGACCGTTGACGGTGAAGAGCCTCCTAGGGTTTTTCATTTCAACCCGAGGTTGAAGGGGGATTGGAGTGGTAAACCTGTGATTGAACTCAACACGTGTTACCGCATGCAGTGGGGTTCTGCTATTAGATGTGACGGTTGGAAATCTAAGGCCGATGATGATACCGTTGATAGGATGGTGAAGTGTGAGAAGTGGATTCGGGATGATGAAGATCACTTGGAGGGGTCTAAGGCGACGTGGTGGTTGAATAGACTGATAGGGCGCACGAAGAAAGTAACTGTTGACTGGCCATTCCCGTTTTCTGAGGGGAAGCTTTTTGTTCTTACTGTTAGTGCTGGGCTGGAGGGGTATCATGTTTCTGTTGATGGGAGGCATGTGACCTCTTTTCCTTATGGCACTGGTTTTACTCTTGAGGATGCCACCGGGCTTTCGTTGACTGGAGACATTGATGTCCACTCTGTATTTGCGGCATCTTTGCCTTCATCGCATCCCAGTTTTGCCCCACAGCGGCATCTTGAATTTTCCACTAGGTGGCGTACTCAGCCACTTCCTGAGTCTGGCGTCGAATTGTTCATTGGTGTCCTCTCGGCTGGAAACCATTTTGCTGAGCGTATGGCTGTGAGGAAGTCATGGATGCAACATAGGCTCGTCAAATCTGGAGCAGTGGTTGCTCGTTTCTTTGTGGCACTGCATGCAAGACAAGAAATTAATGCAGAGTTGAAGAAGGAAGCCGAATTTTTTGGTGATATTGTTATTGTGCCTTATTTGGATAACTATGACCTTGTTGTGTTGAAAACAGTAGCCATATGTGAATATGGGGTACATACAGTTTCTGCTAAGTATGTCATGAAAGGTGATGATGACACTTTTGTTAGAGTGGATGCTGTTATCGATGAAGCAAGGAAGGTTCCAGATGGTTCAAGCTTTTATATTGGGAACATAAATTACTACCACAAACCCTTGCGCTATGGGAAATGGGCAGTGACATATGCAGAGTGGCCAGAAGAGGATTACCCACCCTATGCTAATGGCCCGGGTTATATTTTGTCATCAGATATTGCACGCTATATCGTATCTGAATTCGATATGCGTAAATTAAGGTTGTTCAAGATGGAAGATGTGAGTATGGGAATGTGGGTGGAGCAATTCAACAGCTCAAAACCAGTACACTACTCGCATAGCTTGAAGTTCTGCCAGTTTGGTTGCATAGAAGATTATTACACCGCCCATTACCAATCGCCTAGGCAGATGATGTGCCTGTGGGATAAACTGCAAAGGAATTCAAGGCCTCAATGCTGCAACATGAGATGA 1962 0.4929 MMKRKLETLVWLTRKRSIQFLIGVFFLYLVLVTLEIPFVFKTDFASVTTTRPPRLRSEEDSLRKESPARPLKTVSNADSPSQLAHRPNSSVVSALVLNDAAFDSHVNDGSSELYKQVKHAREVGRSLWEHLESGKPLTRTVAENRPGSCPGSVSLSGSDVVDVSGVVPLPCGLTLGSHITVVGKPLAAKPDFEPKITVVAENEPVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWSGKPVIELNTCYRMQWGSAIRCDGWKSKADDDTVDRMVKCEKWIRDDEDHLEGSKATWWLNRLIGRTKKVTVDWPFPFSEGKLFVLTVSAGLEGYHVSVDGRHVTSFPYGTGFTLEDATGLSLTGDIDVHSVFAASLPSSHPSFAPQRHLEFSTRWRTQPLPESGVELFIGVLSAGNHFAERMAVRKSWMQHRLVKSGAVVARFFVALHARQEINAELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYVMKGDDDTFVRVDAVIDEARKVPDGSSFYIGNINYYHKPLRYGKWAVTYAEWPEEDYPPYANGPGYILSSDIARYIVSEFDMRKLRLFKMEDVSMGMWVEQFNSSKPVHYSHSLKFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRNSRPQCCNMR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1585 653 Gene3D - 161 281 - -
Gso6g1585 653 Pfam Galactoside-binding lectin 167 372 IPR001079 GO:0030246
Gso6g1585 653 Pfam Galactosyltransferase 420 600 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso6g1585 653 Gene3D - 398 649 - -
Gso6g1585 653 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 374 IPR001079 GO:0030246
Gso6g1585 653 MobiDBLite consensus disorder prediction 53 67 - -
Gso6g1585 653 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 653 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso6g1585 653 MobiDBLite consensus disorder prediction 50 85 - -
Gso6g1585 653 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 7 653 - -
Gso6g1585 653 Gene3D - 286 372 - -
Gso6g1585 653 SMART Gal_bind_lectin_2 169 373 IPR001079 GO:0030246
Gso6g1585 653 CDD GLECT 168 372 IPR001079 GO:0030246
Gso6g1585 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 166 372 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1585 Gso-Chr6 16467652 16471517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1585 5 653 Glycosyltransferase AT1G74800 62.519 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1585 K20843 - gmx:100795908 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1585 6 16467652 16471517 Gso6g1585 6 16467652 16471517 ECH
Gso4g1476 4 43416453 43420247 Gso6g1585 6 16467652 16471517 GST
Gso5g0264 5 2742287 2746284 Gso6g1585 6 16467652 16471517 PCT
Gso17g0800 17 7480527 7484435 Gso6g1585 6 16467652 16471517 PCT
Gso6g1585 6 16467652 16471517 Gso5g0264 5 2742287 2746284 PCT
Gso6g1585 6 16467652 16471517 Gso17g0800 17 7480527 7484435 PCT