Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1476 ATGATGAAGCGAAAGCTAGAAACGTTGGTGTGGCTAACACGAAAACGATCGATTCAGTTTCTAATCGGTGTTTTTTTCCTCTACCTCGTACTTGTCACACTCGAACTCCCGTTTGTTTTCAGAACCGACTTCGCAACCGTGACCACCACGCGCTCCCCGAGGCTCCTAAGTGAAGAGGATTCGCTACGAAAGGACTCCCCGGCGCGTCCTTTGAAAACGGTTTCCAACGCTGACTCGCCGAGTCAACTCGCGCGCCGCCGCAGCAGCGTCGTTTCCGCGTTGGTCCTAAACGACGCCGCGTTCGGCTCCCACGTAAACAACGGGTCGTCGGAGCTCTACAAGCAAGTGAAGCACGCGCGCGAGGTTGGGCGGAGTCTCTGGGAAGACCTCGAATCTGGAAAGCCGCTAACCCGAACCGTTGCCGCTCGGGCGGCCAAGAACCGGTCCGGTTCGTGTCCCGGTTCGGTCTCGCTTTCCGGTCCGGAAGTTGTTGACGTCTCGGGCGTCGTGCCGTTGCCGTGTGGGCTCACGTTGGGGTCCCACATAACGGTCGTTGGGAAGCCGTTGGAGGCTAGGCCGGATTTCGAGCCGAAGATAACGGTGGTGACGGAGGATGAGCCCGTGATGGTGTCGCAGTTCGTGGTGGAGTTGCAGGGGCTGAAAACTGTTGATGGTGAAGAGCCTCCTAGGGTTTTTCACTTCAACCCTAGGTTGAAGGGGGATTGGGGTGGAAAACCTGTTATCGAACTAAACACGTGTTACCGCATGCAGTGGGGTTCTGCTCTTAGATGTGACGGTTGGAAATCTAAGGCCGATGAAGATACCGTTGATAGTATGGCAAAGTGTGAGAAGTGGATTCGGGATGATGAAGATCATTTGGAGGGATCTAAGGCGACGTGGTGGTTGAGTAGACTGATAGGGCACACGAAGAAAGTAACCATTGACTGGCCATTCCCGTTTTCTGAGGGGAAGCTGTTTGTTCTTTCTATTAGTGCTGGGTTGGAGGGGTATCATGTTTCTGTGGATGGGAGGCATGTGACCTCTTTTCCTTATCGCGCTGGTTTTACCCTTGAGGATGCCACCGGGCTTTCGTTGACAGGAGACATTGATGTCCACTCTGTATTTGCGGCGTCTTTGCCTTCATCGCATCCCAGTTTTGCCCCGCAGCGGCATCTTGAATTTTCCACCAGGTGGCGTGCTCAGCCACTTCATGACTCTGGCATCGAATTGTTCATTGGTGTCCTCTCTGCTGGAAACCATTTTGCTGAGCGGATGGCTGTGAGGAAATCATGGATGCAGCATAGGCTCATCAAATCTGGAGTAGTGGTTGCTCGTTTCTTTGTGGCACTGCATGCAAGACAAGAAATTAATGCAGAGTTGAAGAAGGAAGCAGAATTTTTTGGTGATATTGTTATAGTGCCGTATTTGGATAACTATGATCTTGTTGTGTTGAAAACAGTGGCCATATGTGAATATGGGGTACATACGGTTTCTGCTAAGTATGTCATGAAAGGTGATGATGACACTTTTGTTAGAGTGGATGCCGTTATCGATGAAGCAAGGAAGGTTCCAGATGGTACAAGCTTTTATATTGGGAATATAAATTACTACCACAAACCCTTGCGCTATGGGAAATGGGCAGTGACATATGAAGAGTGGCCAGAAGAGGATTACCCACCCTATGCTAATGGACCTGGTTATATTTTGTCATCAGATATCGCACGCTATATTGTATCTGAATTCGAAATGCATAAATTAAGGTTGTTCAAGATGGAAGATGTGAGTATGGGAATGTGGGTGGAGCAATTCAACAGCTCAAAACCAGTACACTACTCGCATAGCTTGAAGTTCTGCCAATTTGGTTGCATAGAAGACTATTACACTGCCCATTACCAATCGCCGAGGCAGATGATGTGCCTGTGGGATAAACTGCAAAGGTATTCAAGGCCTCAATGCTGCAACATGAGATGA 1971 0.4972 MMKRKLETLVWLTRKRSIQFLIGVFFLYLVLVTLELPFVFRTDFATVTTTRSPRLLSEEDSLRKDSPARPLKTVSNADSPSQLARRRSSVVSALVLNDAAFGSHVNNGSSELYKQVKHAREVGRSLWEDLESGKPLTRTVAARAAKNRSGSCPGSVSLSGPEVVDVSGVVPLPCGLTLGSHITVVGKPLEARPDFEPKITVVTEDEPVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWGGKPVIELNTCYRMQWGSALRCDGWKSKADEDTVDSMAKCEKWIRDDEDHLEGSKATWWLSRLIGHTKKVTIDWPFPFSEGKLFVLSISAGLEGYHVSVDGRHVTSFPYRAGFTLEDATGLSLTGDIDVHSVFAASLPSSHPSFAPQRHLEFSTRWRAQPLHDSGIELFIGVLSAGNHFAERMAVRKSWMQHRLIKSGVVVARFFVALHARQEINAELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYVMKGDDDTFVRVDAVIDEARKVPDGTSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYIVSEFEMHKLRLFKMEDVSMGMWVEQFNSSKPVHYSHSLKFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRYSRPQCCNMR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1476 656 Pfam Galactosyltransferase 423 603 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso4g1476 656 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 656 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso4g1476 656 Gene3D - 164 375 - -
Gso4g1476 656 SMART Gal_bind_lectin_2 172 376 IPR001079 GO:0030246
Gso4g1476 656 Gene3D - 405 651 - -
Gso4g1476 656 SMART galectin_3 166 377 IPR001079 GO:0030246
Gso4g1476 656 CDD GLECT 169 375 IPR001079 GO:0030246
Gso4g1476 656 MobiDBLite consensus disorder prediction 55 83 - -
Gso4g1476 656 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 7 656 - -
Gso4g1476 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 169 375 IPR013320 -
Gso4g1476 656 Pfam Galactoside-binding lectin 170 375 IPR001079 GO:0030246
Gso4g1476 656 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 168 377 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1476 Gso-Chr4 43416453 43420247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1476 5 656 Glycosyltransferase AT1G74800 61.584 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1476 K20843 - gmx:100816777 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1476 4 43416453 43420247 Gso6g1585 6 16467652 16471517 GST
Gso5g0264 5 2742287 2746284 Gso4g1476 4 43416453 43420247 PCT
Gso17g0800 17 7480527 7484435 Gso4g1476 4 43416453 43420247 PCT
Gso4g1476 4 43416453 43420247 Gso5g0264 5 2742287 2746284 PCT
Gso4g1476 4 43416453 43420247 Gso17g0800 17 7480527 7484435 PCT