Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1524 ATGATGCAGTCGTTGATGAGCATGAAGGCTTGCGTGGGTACGAGGTTACCAGTTTTAACGAACTCCGAGGCGAGTACGAGGAAGCAGCGCGTGAATTATCCGAACCGTAGGTATGGGAGAAATGTGATTGTTTCGTGCGGTTTGGAGAGGAATGGGAACGAAGGAATGGGTTCGAACGAAGGTTCGTTTAGCCATAATTACGCTATCTTGAAGCACCGGATGGAGAAAGTGGCTAAGTCCGAGTATTACGAAGAGGCTGCGAGGATTCGTGACTCGCTCAAGTGCTTCGAAGATGAGGTTCCCGTTCTGCGTCTTCGGAGATTGTTGAAGGAAGCCGTTGCTGATGAGAGGTTTCAGGACGCAGCCAGATATCGTGATGAGCTCAAAGCAATTGCTCCACATTCTCTCTTAAAATGCTCAAGTGATGCGACAACCTTGGGAATCCGTGTCCAAGTTAAGAGTGCATATATAGAGGCCAGAAGTCAGCCTTCAGAGGAGGTATATTTCTATGAATACAGAATCAGAATTACCAATAATACAAACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATATCTGATGCTAATGGGAAAATTGAAAATATCTGGGGAATTGGAGTTGTTGGTGAACAACCAGCTATCTTTCCAAGGAGTAGTTTTGAATTCTCTTCTACATGCCCTTTAAGCACACAAAATGGTAGAATGGAAGGTGACTTTGAGATGATATATGTTGATCGAGTAGGCTCAAGAGCATTTAATGTTGCCGTTGCCCCTTTCTCACTCTCTCTACTTGGAGATGGTGAAACTACTTGA 816 0.4485 MMQSLMSMKACVGTRLPVLTNSEASTRKQRVNYPNRRYGRNVIVSCGLERNGNEGMGSNEGSFSHNYAILKHRMEKVAKSEYYEEAARIRDSLKCFEDEVPVLRLRRLLKEAVADERFQDAARYRDELKAIAPHSLLKCSSDATTLGIRVQVKSAYIEARSQPSEEVYFYEYRIRITNNTNRPVQLLRRHWIISDANGKIENIWGIGVVGEQPAIFPRSSFEFSSTCPLSTQNGRMEGDFEMIYVDRVGSRAFNVAVAPFSLSLLGDGETT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1524 271 ProSiteProfiles ApaG domain profile. 142 269 IPR007474 -
Gso6g1524 271 ProSiteProfiles UVR domain profile. 99 134 IPR001943 GO:0005515
Gso6g1524 271 Pfam ApaG domain 159 243 IPR007474 -
Gso6g1524 271 Pfam UvrB/uvrC motif 104 131 IPR001943 GO:0005515
Gso6g1524 271 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 60 97 IPR036876 -
Gso6g1524 271 PANTHER OS05G0170800 PROTEIN 48 269 - -
Gso6g1524 271 SUPERFAMILY ApaG-like 144 263 IPR036767 -
Gso6g1524 271 Gene3D ApaG domain 138 267 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1524 Gso-Chr6 15563857 15567198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1524 - K06195 gmx:100780493 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1524 6 15563857 15567198 Gso6g1524 6 15563857 15567198 ECH
Gso4g1552 4 44937123 44939653 Gso6g1524 6 15563857 15567198 GST
Gso5g0324 5 3377769 3381929 Gso6g1524 6 15563857 15567198 PCT
Gso17g0745 17 6873341 6877396 Gso6g1524 6 15563857 15567198 PCT
Gso6g1524 6 15563857 15567198 Gso5g0324 5 3377769 3381929 PCT
Gso6g1524 6 15563857 15567198 Gso17g0745 17 6873341 6877396 PCT