Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0324 ATGCAATCCTTATCGTTAAGTATGAGTCTGAGGAGTAGTAGTTTAGCGAATTTTCTGTTGCTGAGTTCAGAGACGAGAGTGAGAAGAAGAAGAAGGAGTGTCATCGTAGCGTGTGCTTTGGAGGGAGACAGTGGTAGCAGTAGCACAAGCTCCTTTCTCTCTCGGACCCAAACCTACGCCCTTCTTAAGCAACAATTGCAAGTGGCTGCTAAATCTGAGGATTACAAGGAAGCAGCTAGAATTCGAGACTCGTTGAAGCAATTTGAGGACGAGGAGCCTGTTTTGCGTCTGAGGAGACTATTGAAGGAAGCAATTGCTGAAGAGAGATTCCAGGATGCTGCTAGTTACCGTGATGAGCTAAACAATATTGCCCCACACTCTCTTTTAAAATGTTGCAGCGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGCTATACTTCTTTGCATATAGAATAAGAATTACCAATAACTCAGACCACCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAGAACGGAAAATGTCTGGGGAATTGGAGTTGTTGGTGAACAGCCATTAATACTTCCTGGAAATAGTTTTGAATACTCTTCAGCATGCCCACTGAACACACCAAATGGTAGAATGGAAGGTGATTATGAGATGATCCATTTTGAAAGAGTAGGCTCACGATCATTCAATGTGGCCATTGCCCCGTTTTCTCTCTCTCTGCTTGGAGATGATGAAGGTTGTGTTATTTGA 798 0.4311 MQSLSLSMSLRSSSLANFLLLSSETRVRRRRRSVIVACALEGDSGSSSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKQFEDEEPVLRLRRLLKEAIAEERFQDAASYRDELNNIAPHSLLKCCSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDHPVQLLRRHWIITDANGRTENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDYEMIHFERVGSRSFNVAIAPFSLSLLGDDEGCVI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0324 265 ProSiteProfiles UVR domain profile. 56 91 IPR001943 GO:0005515
Gso5g0324 265 Pfam ApaG domain 152 235 IPR007474 -
Gso5g0324 265 PANTHER OS05G0170800 PROTEIN 39 261 - -
Gso5g0324 265 ProSiteProfiles UVR domain profile. 91 126 IPR001943 GO:0005515
Gso5g0324 265 Gene3D ApaG domain 130 259 IPR036767 -
Gso5g0324 265 Hamap Protein ApaG [apaG]. 133 265 IPR023065 -
Gso5g0324 265 SUPERFAMILY ApaG-like 136 255 IPR036767 -
Gso5g0324 265 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 57 89 IPR036876 -
Gso5g0324 265 Pfam UvrB/uvrC motif 62 90 IPR001943 GO:0005515
Gso5g0324 265 Pfam UvrB/uvrC motif 96 123 IPR001943 GO:0005515
Gso5g0324 265 ProSiteProfiles ApaG domain profile. 134 261 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0324 Gso-Chr5 3377769 3381929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0324 - K06195 gmx:100784413 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0324 5 3377769 3381929 Gso17g0745 17 6873341 6877396 GST
Gso5g0324 5 3377769 3381929 Gso4g1552 4 44937123 44939653 PCT
Gso5g0324 5 3377769 3381929 Gso6g1524 6 15563857 15567198 PCT
Gso4g1552 4 44937123 44939653 Gso5g0324 5 3377769 3381929 PCT
Gso6g1524 6 15563857 15567198 Gso5g0324 5 3377769 3381929 PCT