Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1552 ATGATGCAGTCGTTGATGAGCATGAAGGCTTACGTGGGTACGAGGTTACCGATTTTAACGAATTCCGAGACGAGTACGAGGAAGCAGCGCGTGAATTGTCCGAACCGTAGGAATGTGATGGTTTCGTGCGGTTCGGAGAGGAATGGGAACGAAGGAATAGGTTCGAACTCAGGTTCGTTTATGTCTCCGAGCCATAATTACGCGATCTTGAAGCACCGGATGGAGAAAGCGGCCAAGTCCGAGTATTACGAAGAGGCTTCGAGGATTCGTGACTCGCTCAAGTGCTTCGAAGATGAGATTCCTGTTCTGCGTCTGAGGAGATTGTTGAAGGAAGCCGTTGCTGATGAGAGGTTTCAGGACGCAGCTAGATATCGTGATGAGCTAAAAGAAATTGCTCCACATTCTCTCTTAAAATGCTCAAGTGATGCGACAACCTTGGGAATCCGGGTCCAAGTGAAGAGTGCATATATAGAGGGCAGAAGTCAGCCTTCAGAGGAGGTATATTCCTTTGAATATAGAATCAAAATTACCAATAACACAAACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATATCTGATGCTAATGGGAAAACTGAAAATATTTGGGGAATTGGAGTTGTTGGTGAACAGCCAGCTATCTTTCCTAGGAGTAGTTTTGAATTCTCTTCTACATGCCCATTAAGCACACAAAATGGTAGAATGGAAGGTGACTTTGAGATGATACATGTTGATCGAGTAGGCTCAAGAGCATTTAATGTCGCCATTGCCCCTTTCTCGCTCTCTCTACTAGGAGATGGTGATGGTGAAACTACTTAA 822 0.4501 MMQSLMSMKAYVGTRLPILTNSETSTRKQRVNCPNRRNVMVSCGSERNGNEGIGSNSGSFMSPSHNYAILKHRMEKAAKSEYYEEASRIRDSLKCFEDEIPVLRLRRLLKEAVADERFQDAARYRDELKEIAPHSLLKCSSDATTLGIRVQVKSAYIEGRSQPSEEVYSFEYRIKITNNTNRPVQLLRRHWIISDANGKTENIWGIGVVGEQPAIFPRSSFEFSSTCPLSTQNGRMEGDFEMIHVDRVGSRAFNVAIAPFSLSLLGDGDGETT* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1552 273 SUPERFAMILY ApaG-like 144 263 IPR036767 -
Gso4g1552 273 ProSiteProfiles UVR domain profile. 99 134 IPR001943 GO:0005515
Gso4g1552 273 ProSiteProfiles UVR domain profile. 64 99 IPR001943 GO:0005515
Gso4g1552 273 PANTHER OS05G0170800 PROTEIN 25 268 - -
Gso4g1552 273 Pfam UvrB/uvrC motif 104 131 IPR001943 GO:0005515
Gso4g1552 273 ProSiteProfiles ApaG domain profile. 142 269 IPR007474 -
Gso4g1552 273 Pfam ApaG domain 160 243 IPR007474 -
Gso4g1552 273 Gene3D ApaG domain 138 267 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1552 Gso-Chr4 44937123 44939653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1552 - K06195 gmx:100799029 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1552 4 44937123 44939653 Gso6g1524 6 15563857 15567198 GST
Gso5g0324 5 3377769 3381929 Gso4g1552 4 44937123 44939653 PCT
Gso17g0745 17 6873341 6877396 Gso4g1552 4 44937123 44939653 PCT
Gso4g1552 4 44937123 44939653 Gso5g0324 5 3377769 3381929 PCT
Gso4g1552 4 44937123 44939653 Gso17g0745 17 6873341 6877396 PCT