Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0745 ATGCAATCGTTATCGTTGAGTATGAGTCTGAGGAGTAGTAGCTTAGTGAATTTTCTTTTGCTGGGTTCAGAGACGAGAGTGAGAAGCAGAAGGAGTGTCATCGTAGCGTGTGCTTCAGAGGGAGACAGTGGCAGCAGTAGCACAAGCTCGTTTCTCTCTCGGACCCAAACCTACGCTCTTCTTAAGCAACAATTGCAAGTAGCTGCTAAATCCGAGGATTACAAGGAAGCCGCTAGAATTCGAGACTCGTTGAAGCTATTTGAGGACGAGGAACCTGTTTTGCGTCTGAGGAGACTATTGAAGGAAGCAGTTGCTGAAGAGAGATTTCAGGATGCTGCTAGTTATCGTGATGAGCTAAACAAAATTGCTCCACACTCTCTTTTAAAATGTTGCAGTGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGCTATATTTCTTTGCATATAGAATAAGAATTACTAATAACTCAGAACACCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAGAACGGAAAATGTCTGGGGAATTGGAGTTGTTGGTGAACAGCCATTAATACTTCCTGGGAATAGTTTTGAATACTCTTCAGCATGCCCACTGAACACACCAAATGGTAGAATGGAAGGTGATTATGAGATGATCCATGTAGAAAGAGTAGGCTCACAATCATTCAATGTGGCCATTGCCCCGTTTTCTCTCTGTCTGCTTGGAGATGATGAAGGTTGTATTATTTAA 795 0.4252 MQSLSLSMSLRSSSLVNFLLLGSETRVRSRRSVIVACASEGDSGSSSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEDEEPVLRLRRLLKEAVAEERFQDAASYRDELNKIAPHSLLKCCSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSEHPVQLLRRHWIITDANGRTENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDYEMIHVERVGSQSFNVAIAPFSLCLLGDDEGCII* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0745 264 ProSiteProfiles UVR domain profile. 55 90 IPR001943 GO:0005515
Gso17g0745 264 ProSiteProfiles ApaG domain profile. 133 260 IPR007474 -
Gso17g0745 264 ProSiteProfiles UVR domain profile. 90 125 IPR001943 GO:0005515
Gso17g0745 264 Pfam ApaG domain 151 234 IPR007474 -
Gso17g0745 264 Hamap Protein ApaG [apaG]. 132 264 IPR023065 -
Gso17g0745 264 SUPERFAMILY ApaG-like 135 254 IPR036767 -
Gso17g0745 264 Gene3D ApaG domain 129 258 IPR036767 -
Gso17g0745 264 Pfam UvrB/uvrC motif 95 122 IPR001943 GO:0005515
Gso17g0745 264 Pfam UvrB/uvrC motif 61 88 IPR001943 GO:0005515
Gso17g0745 264 PANTHER OS05G0170800 PROTEIN 37 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0745 Gso-Chr17 6873341 6877396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0745 - K06195 gmx:100782176 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0324 5 3377769 3381929 Gso17g0745 17 6873341 6877396 GST
Gso17g0745 17 6873341 6877396 Gso4g1552 4 44937123 44939653 PCT
Gso17g0745 17 6873341 6877396 Gso6g1524 6 15563857 15567198 PCT
Gso4g1552 4 44937123 44939653 Gso17g0745 17 6873341 6877396 PCT
Gso6g1524 6 15563857 15567198 Gso17g0745 17 6873341 6877396 PCT