Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1516 ATGGGCATCATGAAAAGACATTCACAACACAGCAGCAATGATCCATTTTGTGAAGCTCACAACAGAACAAGACAACAACACCAATGCATGATGATGATACAACAACCAAACAATGATGTTGTTGTTGTCCCAGAACACACATGTGCACAACAACACCAAAACCAATCTCCAAAATTGGCTTCTTCTTCTTTCACTTCCCAAAATGCTACACCTGTGCTACCTGCTTTTGTTGCCTTGCTGCTCCTTGTTACTTCAATTGCCCCAACAGCATTGTGCCACCCCTTGCAGGGCACTAACCACACTTTTAGGCCAAATCATGAGTTGCTCAAGTTGAGGAGAGTCAGAGCTCACTTGAAGAAAATCAACAAGCCTCCCGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCACCAGCAACCTGCTTTTGACAATCCTAAGCTTAGAGGCCACAAAATATTGGATCCCCCAGAGAGGCCAAAGGGAAACCACACCAATGGTGAAGCTGAAAGGGTAATTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAGCATGCCCAGAAGGAACTGTTCCAATCAGAAGAACTACAGAGGAGGATATTCTCAGAGCAAGCTCTATCCAAAGATTTGGAAGAAAACCAAGACCTGTACGGAGAGACTCTACTGGCAGTGGTCATGAGCATGCAGTTGTTTTTGTAAATGGGGATCAATACTATGGAGCAAAAGCTAGCATAAACGTGTGGGCACCCCGTGTAACTGATGAATTTGAATTCAGCTTGTCACAAATGTGGGTTATTGCTGGCTCCTTTGGTAAAGATCTCAACACCATAGAAGCTGGTTGGCAGGTAAGTCCACAGCTATATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACTACTGATGCATATCAAACAACTGGGTGCTACAACTTACTCTGTTCAGGCTTTATTCAAACCAACAATAGGATAGCAATAGGTGCTGCAATTTCCCCAAGATCCGCTTTCAACAGAAGACAATTTGATATTGGCCTAATGATTTGGAAGGATCCAAAGCATGGGCACTGGTGGCTGGAATTCGGGTCAGGACTACTAGTAGGGTATTGGCCAGCAAACATGTTCAGTCACTTGAGGAACCATGCAAGCATGGTGCAATTTGGAGGAGAAATTGTGAACACTCGTTCAAGGGGTTACCACACTGGCACCCAAATGGGGAGTGGCAATTTTGCTGAAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAATATTCACCAGTTGGCTGATCATTCCAATTGCTATAACATAAGGCAGGGAACCAACAGTGTTTGGGGCACTTACTTTTACTATGGAGGGCCTGGAAGGAATGTGAGATGCCCATGA 1440 0.4389 MGIMKRHSQHSSNDPFCEAHNRTRQQHQCMMMIQQPNNDVVVVPEHTCAQQHQNQSPKLASSSFTSQNATPVLPAFVALLLLVTSIAPTALCHPLQGTNHTFRPNHELLKLRRVRAHLKKINKPPVKTIQSPDGDLIDCVLSHQQPAFDNPKLRGHKILDPPERPKGNHTNGEAERVIESFQLWSDSGEACPEGTVPIRRTTEEDILRASSIQRFGRKPRPVRRDSTGSGHEHAVVFVNGDQYYGAKASINVWAPRVTDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRIAIGAAISPRSAFNRRQFDIGLMIWKDPKHGHWWLEFGSGLLVGYWPANMFSHLRNHASMVQFGGEIVNTRSRGYHTGTQMGSGNFAEEGFRKAAYFRNLQVVDWDNSLLPLRNIHQLADHSNCYNIRQGTNSVWGTYFYYGGPGRNVRCP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1516 479 Pfam Neprosin activation peptide 128 236 IPR025521 -
Gso6g1516 479 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 50 479 - -
Gso6g1516 479 MobiDBLite consensus disorder prediction 150 171 - -
Gso6g1516 479 MobiDBLite consensus disorder prediction 153 171 - -
Gso6g1516 479 Pfam Neprosin 262 472 IPR004314 -
Gso6g1516 479 PANTHER CARBOXYL-TERMINAL PEPTIDASE 50 479 - -
Gso6g1516 479 Gene3D - 253 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1516 Gso-Chr6 15366175 15372094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1516 - - gmx:100777828 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1516 6 15366175 15372094 Gso6g1516 6 15366175 15372094 ECH
Gso4g1564 4 45144037 45149822 Gso6g1516 6 15366175 15372094 GST
Gso5g0334 5 3474166 3478033 Gso6g1516 6 15366175 15372094 PCT
Gso17g0733 17 6759733 6763698 Gso6g1516 6 15366175 15372094 PCT
Gso6g1516 6 15366175 15372094 Gso5g0334 5 3474166 3478033 PCT
Gso6g1516 6 15366175 15372094 Gso17g0733 17 6759733 6763698 PCT